Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8OGH

Truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Mycobacterium tuberculosis with butylacetylphosphonate (BAP) bound

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B1-deoxy-D-xylulose-5-phosphate synthasepolymer60463685.12UniProt (P9WNS3)
Pfam (PF13292)
Pfam (PF02779)
Pfam (PF02780)
In PDB
Mycobacterium tuberculosis H37Rv1-deoxyxylulose-5-phosphate synthase,DXP synthase,DXPS
2A, B[(S)-1-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-5-[2-[oxidanyl(phosphonooxy)phosphoryl]oxyethyl]-1,3-thiazol-3-ium-2-yl]-1-oxidanyl-ethyl]-butoxy-phosphinic acidnon-polymer605.52Chemie (VMI)
3AGLYCEROLnon-polymer92.11Chemie (GOL)
4A, B1,2-ETHANEDIOLnon-polymer62.110Chemie (EDO)
5A, BMAGNESIUM IONnon-polymer24.32Chemie (MG)
6BDI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
7waterwater18.01318Chemie (HOH)
Sequence modifications
A, B: 1 - 227 (UniProt: P9WNS3)
PDBExternal DatabaseDetails
Gly -3-expression tag
Ala -2-expression tag
Met -1-expression tag
Gly 0-expression tag
A, B: 235 - 638 (UniProt: P9WNS3)
PDBExternal DatabaseDetails
Gly 228-linker
Gly 229-linker
Gly 230-linker
Gly 231-linker
Gly 232-linker
Gly 233-linker
Gly 234-linker
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight127370.2
Non-Polymers*Number of molecules16
Total formula weight2078.4
All*Total formula weight129448.6
*Water molecules are not included.

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon