8ODP
Structure of human RTCB with GMPCPP in complex with Archease
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G (A, C, E, G) | RNA-splicing ligase RtcB homolog | polymer | 507 | 55412.3 | 4 | UniProt (Q9Y3I0) Pfam (PF01139) | Homo sapiens (human) | 3'-phosphate/5'-hydroxy nucleic acid ligase |
| 2 | B, D, F, H (B, D, F, H) | Protein archease | polymer | 183 | 21108.6 | 4 | UniProt (A8K0B5) Pfam (PF01951) | Homo sapiens (human) | |
| 3 | I, J, L, M, N... (A, B, C, D, E...) | MANGANESE (II) ION | non-polymer | 54.9 | 12 | Chemie (MN) | |||
| 4 | K, O, S, W (A, C, E, G) | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | non-polymer | 521.2 | 4 | Chemie (G2P) | |||
| 5 | AA, BA, CA, DA, EA... (C, D, E, F, G...) | water | water | 18.0 | 297 | Chemie (HOH) |
Sequence modifications
A, C, E, G: 1 - 505 (UniProt: Q9Y3I0)
B, D, F, H: 1 - 179 (UniProt: A8K0B5)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ala 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| His -1 | - | expression tag |
| Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 306083.5 | |
| Non-Polymers* | Number of molecules | 16 |
| Total formula weight | 2744.1 | |
| All* | Total formula weight | 308827.6 |
