8JIW
Atomic structure of wheat ribosome reveals unique features of the plant ribosomes
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | Ad | 18S rRNA | polymer | 1811 | 584375.5 | 1 | GenBank (XR_006452643.1) | Triticum aestivum (bread wheat) | |
2 | BA | 40S ribosomal protein SA | polymer | 304 | 32926.1 | 1 | UniProt (A0A3B6AV88) Pfam (PF00318) Pfam (PF16122) In PDB | Triticum aestivum (bread wheat) | |
3 | BB | 40S ribosomal protein S3a | polymer | 263 | 30044.0 | 1 | UniProt (A0A3B6IU74) Pfam (PF01015) In PDB | Triticum aestivum (bread wheat) | |
4 | BC | S5 DRBM domain-containing protein | polymer | 279 | 30482.4 | 1 | UniProt (A0A3B6N0N5) Pfam (PF00333) Pfam (PF03719) In PDB | Triticum aestivum (bread wheat) | |
5 | BE | 40S ribosomal protein S4 | polymer | 265 | 30008.1 | 1 | UniProt (A0A1D5SLI4) Pfam (PF01479) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) Pfam (PF08071) In PDB | Triticum aestivum (bread wheat) | |
6 | BG | 40S ribosomal protein S6 | polymer | 250 | 28522.6 | 1 | UniProt (W5C8N6) Pfam (PF01092) In PDB | Triticum aestivum (bread wheat) | |
7 | BH | 40S ribosomal protein S7 | polymer | 192 | 22297.9 | 1 | UniProt (Q5I7K2) Pfam (PF01251) In PDB | Triticum aestivum (bread wheat) | |
8 | BI | 40S ribosomal protein S8 | polymer | 224 | 25185.8 | 1 | UniProt (A0A3B6C6G0) Pfam (PF01201) In PDB | Triticum aestivum (bread wheat) | |
9 | BJ | 30S ribosomal protein S4, chloroplastic | polymer | 195 | 22534.1 | 1 | UniProt (W5FPA7) Pfam (PF00163) Pfam (PF01479) In PDB | Triticum aestivum (bread wheat) | 40S body ribosomal protein uS4 |
10 | BL | 40S ribosomal protein S11 N-terminal domain-containing protein | polymer | 161 | 18135.3 | 1 | UniProt (A0A3B6QHW3) Pfam (PF16205) Pfam (PF00366) In PDB | Triticum aestivum (bread wheat) | Ribosomal S17 N domain-containing protein |
11 | BN | Ribosomal protein S13/S15 N-terminal domain-containing protein | polymer | 151 | 17132.3 | 1 | UniProt (W5I035) Pfam (PF08069) Pfam (PF00312) In PDB | Triticum aestivum (bread wheat) | |
12 | BO | 40S ribosomal protein S14 | polymer | 151 | 16398.8 | 1 | UniProt (A0A3B6SS17) Pfam (PF00411) In PDB | Triticum aestivum (bread wheat) | 40S ribosomal protein uS11 |
13 | BR | 40S ribosomal protein S17 | polymer | 143 | 16479.1 | 1 | UniProt (A0A3B5XY60) Pfam (PF00833) In PDB | Triticum aestivum (bread wheat) | |
14 | BV | 40S ribosomal protein S21 | polymer | 82 | 9194.3 | 1 | UniProt (W5EL62) Pfam (PF01249) In PDB | Triticum aestivum (bread wheat) | |
15 | BW | 30S ribosomal protein S8, chloroplastic | polymer | 130 | 14815.4 | 1 | UniProt (E2F3W4) Pfam (PF00410) In PDB | Triticum aestivum (bread wheat) | 40S ribosomal protein S15a-1 |
16 | BX | 40S ribosomal protein S23 | polymer | 142 | 15696.5 | 1 | UniProt (W5FV77) Pfam (PF00164) In PDB | Triticum aestivum (bread wheat) | 40S ribosomal protein uS12 |
17 | BY | 40S ribosomal protein S24 | polymer | 137 | 15739.7 | 1 | UniProt (A0A3B6PK86) Pfam (PF01282) In PDB | Triticum aestivum (bread wheat) | |
18 | Ba | 40S ribosomal protein S26 | polymer | 139 | 15319.8 | 1 | UniProt (A0A3B6KQB8) Pfam (PF01283) In PDB | Triticum aestivum (bread wheat) | |
19 | Bb | 40S ribosomal protein S27 | polymer | 86 | 9583.2 | 1 | UniProt (W5HZ68) Pfam (PF01667) In PDB | Triticum aestivum (bread wheat) | |
20 | Be | 40S ribosomal protein S30 | polymer | 62 | 6934.2 | 1 | UniProt (A0A3B6S9M7) Pfam (PF04758) In PDB | Triticum aestivum (bread wheat) | |
21 | Cn | 60S ribosomal protein L41 | polymer | 25 | 3445.4 | 1 | UniProt (P62124) Pfam (PF05162) In PDB | Triticum aestivum (bread wheat) | |
22 | BD | KH type-2 domain-containing protein | polymer | 227 | 25398.7 | 1 | UniProt (W5I1R7) Pfam (PF07650) Pfam (PF00189) In PDB | Triticum aestivum (bread wheat) | |
23 | BF | Ribosomal protein S7 domain-containing protein | polymer | 200 | 22350.9 | 1 | UniProt (W5D067) Pfam (PF00177) In PDB | Triticum aestivum (bread wheat) | |
24 | BK | Plectin/S10 N-terminal domain-containing protein | polymer | 188 | 20464.0 | 1 | UniProt (W5AUH7) Pfam (PF03501) In PDB | Triticum aestivum (bread wheat) | 40S ribosomal protein eS10 |
25 | BP | 40S ribosomal protein S15 | polymer | 153 | 17295.4 | 1 | UniProt (A0A3B6LV48) Pfam (PF00203) In PDB | Triticum aestivum (bread wheat) | 40S ribosomal protein uS19 |
26 | BQ | 40S ribosomal protein S16 | polymer | 149 | 16871.0 | 1 | UniProt (A0A3B6HX49) Pfam (PF00380) In PDB | Triticum aestivum (bread wheat) | 40S ribosomal protein uS9 |
27 | BS | 40S ribosomal protein S18 | polymer | 152 | 17676.6 | 1 | UniProt (A0A3B6TWW5) Pfam (PF00416) In PDB | Triticum aestivum (bread wheat) | 40S ribosomal protein uS13 |
28 | BT | 40S ribosomal protein S19 | polymer | 155 | 17097.6 | 1 | UniProt (W5FWF5) Pfam (PF01090) In PDB | Triticum aestivum (bread wheat) | |
29 | BU | Ribosomal protein S10 domain-containing protein | polymer | 117 | 13036.1 | 1 | UniProt (A0A3B6K9W5) Pfam (PF00338) In PDB | Triticum aestivum (bread wheat) | |
30 | Bc | 40S ribosomal protein S28 | polymer | 65 | 7477.8 | 1 | UniProt (W5E8X2) Pfam (PF01200) In PDB | Triticum aestivum (bread wheat) | 40S ribosomal protein eS28 |
31 | Bd | 40S ribosomal protein S29 | polymer | 56 | 6417.5 | 1 | UniProt (A0A1D5ZKM9) Pfam (PF00253) In PDB | Triticum aestivum (bread wheat) | 40S ribosomal protein uS14 |
32 | Bg | Mitogen-activated protein kinase | polymer | 335 | 36314.8 | 1 | UniProt (A0A3B5Z4Q0) Pfam (PF00400) In PDB | Triticum aestivum (bread wheat) | |
33 | BZ | 40S ribosomal protein S25 | polymer | 98 | 10860.6 | 1 | UniProt (A0A3B6HY18) Pfam (PF03297) In PDB | Triticum aestivum (bread wheat) | |
34 | Ad, BT, Bd | POTASSIUM ION | non-polymer | 39.1 | 16 | Chemie (K) | |||
35 | Ad, BS | MAGNESIUM ION | non-polymer | 24.3 | 70 | Chemie (MG) | |||
36 | Bd | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 33 |
Total formula weight | 1176511.6 | |
Non-Polymers* | Number of molecules | 87 |
Total formula weight | 2392.3 | |
All* | Total formula weight | 1178903.9 |