Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

8JIW

Atomic structure of wheat ribosome reveals unique features of the plant ribosomes

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
Ba	0003729	molecular_function	mRNA binding
Ba	0003735	molecular_function	structural constituent of ribosome
Ba	0005840	cellular_component	ribosome
Ba	0006412	biological_process	translation
Ba	0022627	cellular_component	cytosolic small ribosomal subunit
Ba	1990904	cellular_component	ribonucleoprotein complex
BA	0000028	biological_process	ribosomal small subunit assembly
BA	0002181	biological_process	cytoplasmic translation
BA	0003735	molecular_function	structural constituent of ribosome
BA	0005737	cellular_component	cytoplasm
BA	0005840	cellular_component	ribosome
BA	0006412	biological_process	translation
BA	0015935	cellular_component	small ribosomal subunit
BA	0022627	cellular_component	cytosolic small ribosomal subunit
BA	1990904	cellular_component	ribonucleoprotein complex
Bb	0000028	biological_process	ribosomal small subunit assembly
Bb	0003723	molecular_function	RNA binding
Bb	0003735	molecular_function	structural constituent of ribosome
Bb	0005840	cellular_component	ribosome
Bb	0006412	biological_process	translation
Bb	0022627	cellular_component	cytosolic small ribosomal subunit
Bb	0046872	molecular_function	metal ion binding
Bb	1990904	cellular_component	ribonucleoprotein complex
BB	0003735	molecular_function	structural constituent of ribosome
BB	0005737	cellular_component	cytoplasm
BB	0005829	cellular_component	cytosol
BB	0005840	cellular_component	ribosome
BB	0006412	biological_process	translation
BB	0022627	cellular_component	cytosolic small ribosomal subunit
BB	1990904	cellular_component	ribonucleoprotein complex
Bc	0000028	biological_process	ribosomal small subunit assembly
Bc	0003735	molecular_function	structural constituent of ribosome
Bc	0005840	cellular_component	ribosome
Bc	0006412	biological_process	translation
Bc	0022627	cellular_component	cytosolic small ribosomal subunit
Bc	0030490	biological_process	maturation of SSU-rRNA
BC	0003723	molecular_function	RNA binding
BC	0003729	molecular_function	mRNA binding
BC	0003735	molecular_function	structural constituent of ribosome
BC	0005840	cellular_component	ribosome
BC	0006412	biological_process	translation
BC	0015935	cellular_component	small ribosomal subunit
BC	0022627	cellular_component	cytosolic small ribosomal subunit
BC	1990904	cellular_component	ribonucleoprotein complex
Bd	0002181	biological_process	cytoplasmic translation
Bd	0003735	molecular_function	structural constituent of ribosome
Bd	0005840	cellular_component	ribosome
Bd	0006412	biological_process	translation
Bd	0008270	molecular_function	zinc ion binding
Bd	0022627	cellular_component	cytosolic small ribosomal subunit
Bd	1990904	cellular_component	ribonucleoprotein complex
BD	0003723	molecular_function	RNA binding
BD	0003735	molecular_function	structural constituent of ribosome
BD	0005634	cellular_component	nucleus
BD	0005840	cellular_component	ribosome
BD	0006412	biological_process	translation
BD	0015935	cellular_component	small ribosomal subunit
BD	0022626	cellular_component	cytosolic ribosome
BD	0022627	cellular_component	cytosolic small ribosomal subunit
BD	1990904	cellular_component	ribonucleoprotein complex
Be	0003735	molecular_function	structural constituent of ribosome
Be	0005840	cellular_component	ribosome
Be	0006412	biological_process	translation
Be	1990904	cellular_component	ribonucleoprotein complex
BE	0003723	molecular_function	RNA binding
BE	0003735	molecular_function	structural constituent of ribosome
BE	0005840	cellular_component	ribosome
BE	0006412	biological_process	translation
BE	0019843	molecular_function	rRNA binding
BE	0022627	cellular_component	cytosolic small ribosomal subunit
BE	1990904	cellular_component	ribonucleoprotein complex
BF	0000028	biological_process	ribosomal small subunit assembly
BF	0003723	molecular_function	RNA binding
BF	0003729	molecular_function	mRNA binding
BF	0003735	molecular_function	structural constituent of ribosome
BF	0005840	cellular_component	ribosome
BF	0006412	biological_process	translation
BF	0015935	cellular_component	small ribosomal subunit
BF	0019843	molecular_function	rRNA binding
BF	0022627	cellular_component	cytosolic small ribosomal subunit
BF	1990904	cellular_component	ribonucleoprotein complex
Bg	0001934	biological_process	positive regulation of protein phosphorylation
Bg	0005080	molecular_function	protein kinase C binding
Bg	0005634	cellular_component	nucleus
Bg	0005829	cellular_component	cytosol
Bg	0006417	biological_process	regulation of translation
Bg	0043022	molecular_function	ribosome binding
Bg	0045182	molecular_function	translation regulator activity
Bg	0072344	biological_process	rescue of stalled ribosome
BG	0003735	molecular_function	structural constituent of ribosome
BG	0005840	cellular_component	ribosome
BG	0006412	biological_process	translation
BG	1990904	cellular_component	ribonucleoprotein complex
BH	0003735	molecular_function	structural constituent of ribosome
BH	0005840	cellular_component	ribosome
BH	0006364	biological_process	rRNA processing
BH	0006412	biological_process	translation
BH	0022627	cellular_component	cytosolic small ribosomal subunit
BH	0032040	cellular_component	small-subunit processome
BH	0042274	biological_process	ribosomal small subunit biogenesis
BH	1990904	cellular_component	ribonucleoprotein complex
BI	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BI	0003735	molecular_function	structural constituent of ribosome
BI	0005840	cellular_component	ribosome
BI	0006412	biological_process	translation
BI	0022627	cellular_component	cytosolic small ribosomal subunit
BI	1990904	cellular_component	ribonucleoprotein complex
BJ	0003723	molecular_function	RNA binding
BJ	0003735	molecular_function	structural constituent of ribosome
BJ	0005840	cellular_component	ribosome
BJ	0006412	biological_process	translation
BJ	0015935	cellular_component	small ribosomal subunit
BJ	0019843	molecular_function	rRNA binding
BJ	0022627	cellular_component	cytosolic small ribosomal subunit
BJ	0042274	biological_process	ribosomal small subunit biogenesis
BJ	1990904	cellular_component	ribonucleoprotein complex
BK	0003723	molecular_function	RNA binding
BK	0003735	molecular_function	structural constituent of ribosome
BK	0005737	cellular_component	cytoplasm
BK	0022627	cellular_component	cytosolic small ribosomal subunit
BL	0003735	molecular_function	structural constituent of ribosome
BL	0005840	cellular_component	ribosome
BL	0006412	biological_process	translation
BL	0022627	cellular_component	cytosolic small ribosomal subunit
BL	1990904	cellular_component	ribonucleoprotein complex
BN	0003735	molecular_function	structural constituent of ribosome
BN	0005730	cellular_component	nucleolus
BN	0005840	cellular_component	ribosome
BN	0006412	biological_process	translation
BN	0022627	cellular_component	cytosolic small ribosomal subunit
BN	0070181	molecular_function	small ribosomal subunit rRNA binding
BN	1990904	cellular_component	ribonucleoprotein complex
BO	0000028	biological_process	ribosomal small subunit assembly
BO	0003735	molecular_function	structural constituent of ribosome
BO	0005840	cellular_component	ribosome
BO	0006412	biological_process	translation
BO	0022627	cellular_component	cytosolic small ribosomal subunit
BO	1990904	cellular_component	ribonucleoprotein complex
BP	0000028	biological_process	ribosomal small subunit assembly
BP	0003723	molecular_function	RNA binding
BP	0003735	molecular_function	structural constituent of ribosome
BP	0005840	cellular_component	ribosome
BP	0006412	biological_process	translation
BP	0015935	cellular_component	small ribosomal subunit
BP	0022627	cellular_component	cytosolic small ribosomal subunit
BP	1990904	cellular_component	ribonucleoprotein complex
BQ	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BQ	0003723	molecular_function	RNA binding
BQ	0003735	molecular_function	structural constituent of ribosome
BQ	0005840	cellular_component	ribosome
BQ	0006412	biological_process	translation
BQ	0022627	cellular_component	cytosolic small ribosomal subunit
BQ	1990904	cellular_component	ribonucleoprotein complex
BR	0003735	molecular_function	structural constituent of ribosome
BR	0005840	cellular_component	ribosome
BR	0006412	biological_process	translation
BR	1990904	cellular_component	ribonucleoprotein complex
BS	0003676	molecular_function	nucleic acid binding
BS	0003723	molecular_function	RNA binding
BS	0003735	molecular_function	structural constituent of ribosome
BS	0005829	cellular_component	cytosol
BS	0005840	cellular_component	ribosome
BS	0006412	biological_process	translation
BS	0015935	cellular_component	small ribosomal subunit
BS	1990904	cellular_component	ribonucleoprotein complex
BT	0003735	molecular_function	structural constituent of ribosome
BT	0005840	cellular_component	ribosome
BT	0006412	biological_process	translation
BT	1990904	cellular_component	ribonucleoprotein complex
BU	0003735	molecular_function	structural constituent of ribosome
BU	0005840	cellular_component	ribosome
BU	0006412	biological_process	translation
BU	0015935	cellular_component	small ribosomal subunit
BU	0022627	cellular_component	cytosolic small ribosomal subunit
BU	1990904	cellular_component	ribonucleoprotein complex
BV	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BV	0000461	biological_process	endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BV	0003735	molecular_function	structural constituent of ribosome
BV	0005840	cellular_component	ribosome
BV	0006412	biological_process	translation
BV	0022627	cellular_component	cytosolic small ribosomal subunit
BV	1990904	cellular_component	ribonucleoprotein complex
BW	0003735	molecular_function	structural constituent of ribosome
BW	0005840	cellular_component	ribosome
BW	0006412	biological_process	translation
BW	0022627	cellular_component	cytosolic small ribosomal subunit
BW	1990904	cellular_component	ribonucleoprotein complex
BX	0003735	molecular_function	structural constituent of ribosome
BX	0005840	cellular_component	ribosome
BX	0006412	biological_process	translation
BX	0015935	cellular_component	small ribosomal subunit
BX	0022627	cellular_component	cytosolic small ribosomal subunit
BX	1990904	cellular_component	ribonucleoprotein complex
BY	0003735	molecular_function	structural constituent of ribosome
BY	0005840	cellular_component	ribosome
BY	0006412	biological_process	translation
BY	1990904	cellular_component	ribonucleoprotein complex
BZ	0005840	cellular_component	ribosome
BZ	1990904	cellular_component	ribonucleoprotein complex
Cn	0003735	molecular_function	structural constituent of ribosome
Cn	0005840	cellular_component	ribosome
Cn	0006412	biological_process	translation
Cn	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmhgrnnGKKimavrIIkhT

Chain	Residue	Details
BF	GLU81-THR107

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GyiVLTTSaGIMdheeAR

Chain	Residue	Details
BW	GLY100-ARG117

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPvPTD

Chain	Residue	Details
BO	LEU116-ASP138

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR

Chain	Residue	Details
BX	LYS59-ARG66

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDhViIgQcRPLS

Chain	Residue	Details
BL	GLY122-SER134

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKcfnqveIkpemIGhyLAEFslS

Chain	Residue	Details
BP	ASN104-SER128

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGktSQiySirqAiAKSL

Chain	Residue	Details
BQ	GLY75-LEU93

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. IrkHLernRkDkdSkfrLilVesrihrLarY

Chain	Residue	Details
BN	ILE98-TYR128

site_id	PS00528
Number of Residues	15
Details	RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLNaPshWmLdK

Chain	Residue	Details
BE	HIS8-LYS22

site_id	PS00529
Number of Residues	23
Details	RIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKStGFGlIYDNleaakkfE

Chain	Residue	Details
BY	PHE70-GLU92

site_id	PS00548
Number of Residues	37
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfkdGyMisSgqpVneyIDaavrhvlLrqGvlG

Chain	Residue	Details
BD	ALA150-GLY186

site_id	PS00578
Number of Residues	12
Details	RIBOSOMAL_S6E Ribosomal protein S6e signature. IMGGcDkqGfPM

Chain	Residue	Details
BG	ILE52-MET63

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAfvVVGDsn.GhVGlGvkcak.EVat.AI

Chain	Residue	Details
BC	GLY107-ILE139

site_id	PS00628
Number of Residues	20
Details	RIBOSOMAL_S19E Ribosomal protein S19e signature. PphfcksSgaVsRnILQeLQ

Chain	Residue	Details
BT	PRO90-GLN109

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LArRLqtlVFKagmAkSihhARvLI

Chain	Residue	Details
BJ	LEU107-ILE131

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHywGvrVRGQ

Chain	Residue	Details
BS	ARG121-GLN134

site_id	PS00678
Number of Residues	15
Details	WD_REPEATS_1 Trp-Asp (WD) repeats signature. IVSGsrDkSLLVWDL

Chain	Residue	Details
Bg	ILE34-LEU48
Bg	ALA90-LEU104
Bg	ILE132-THR146
Bg	ILE182-LEU196
Bg	CYS224-LEU238

site_id	PS00733
Number of Residues	8
Details	RIBOSOMAL_S26E Ribosomal protein S26e signature. HCVSCAIH

Chain	Residue	Details
Ba	HIS73-HIS80

site_id	PS00948
Number of Residues	14
Details	RIBOSOMAL_S7E Ribosomal protein S7e signature. RLvRELEKKFSgKD

Chain	Residue	Details
BH	ARG79-ASP92

site_id	PS00961
Number of Residues	9
Details	RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL

Chain	Residue	Details
Bc	GLU56-LEU64

site_id	PS00963
Number of Residues	25
Details	RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlLILtDprtDhqpIkEsalgNIP

Chain	Residue	Details
BA	PRO123-PRO147

site_id	PS00996
Number of Residues	9
Details	RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA

Chain	Residue	Details
BV	LEU11-ALA19

site_id	PS01168
Number of Residues	33
Details	RIBOSOMAL_S27E Ribosomal protein S27e signature. KCqgCfnittvFShSqtvvvCpgCQtvLcqPtG

Chain	Residue	Details
Bb	LYS38-GLY70

site_id	PS01191
Number of Residues	13
Details	RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkHRVfEvSLaDL

Chain	Residue	Details
BB	LEU61-LEU73

site_id	PS01193
Number of Residues	20
Details	RIBOSOMAL_S8E Ribosomal protein S8e signature. RraTGGkqkaw.RkKrKyELG

Chain	Residue	Details
BI	ARG10-GLY29

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)