8IUF
Cryo-EM structure of Euglena gracilis super-complex I+III2+IV, composite
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (1A) | NDUFS1a | polymer | 385 | 43888.8 | 1 | Euglena gracilis | ||
| 2 | B (1B) | NDUFS1b | polymer | 527 | 59671.8 | 1 | Euglena gracilis | ||
| 3 | C (2B) | ND2b | polymer | 142 | 15756.8 | 1 | Euglena gracilis | ||
| 4 | D (4A) | COXEG1 | polymer | 246 | 27278.9 | 1 | Euglena gracilis | ||
| 5 | E (4C) | COXEG3 | polymer | 139 | 16394.0 | 1 | Euglena gracilis | ||
| 6 | F (4D) | COXEG4 | polymer | 174 | 19359.5 | 1 | Euglena gracilis | ||
| 7 | G (4E) | COXEG5 | polymer | 165 | 19464.1 | 1 | Euglena gracilis | ||
| 8 | H (4F) | COXEG6 | polymer | 75 | 8728.2 | 1 | Euglena gracilis | ||
| 9 | I (4G) | COXEG7 | polymer | 315 | 35651.5 | 1 | Euglena gracilis | ||
| 10 | J (4H) | COXEG8 | polymer | 221 | 24495.3 | 1 | Euglena gracilis | ||
| 11 | K (4I) | COXEG9 | polymer | 274 | 31754.9 | 1 | Euglena gracilis | ||
| 12 | L (4J) | COXEG10 | polymer | 88 | 10043.3 | 1 | Euglena gracilis | ||
| 13 | M (4L) | ND4L | polymer | 171 | 19673.1 | 1 | Euglena gracilis | ||
| 14 | N (5B) | COX5b-2 | polymer | 174 | 19736.4 | 1 | Euglena gracilis | ||
| 15 | O (5C) | COX5c | polymer | 208 | 23788.3 | 1 | Euglena gracilis | ||
| 16 | P (6A) | COX6a | polymer | 112 | 13079.2 | 1 | Euglena gracilis | ||
| 17 | Q (6B) | COX6b-1 | polymer | 287 | 32995.1 | 1 | Euglena gracilis | ||
| 18 | R (7A) | COX7a | polymer | 178 | 20079.0 | 1 | Euglena gracilis | ||
| 19 | S (7C) | COX7c | polymer | 171 | 19897.6 | 1 | Euglena gracilis | ||
| 20 | T (A1) | NDUFA1 | polymer | 141 | 15659.6 | 1 | Euglena gracilis | ||
| 21 | U (A2) | NDUFA2 | polymer | 193 | 21331.2 | 1 | Euglena gracilis | ||
| 22 | V (A3) | NDUFA3 | polymer | 125 | 14950.3 | 1 | Euglena gracilis | ||
| 23 | W (A5) | NDUFA5 | polymer | 184 | 20961.9 | 1 | Euglena gracilis | ||
| 24 | X (A6) | NDUFA6 | polymer | 437 | 48787.0 | 1 | Euglena gracilis | ||
| 25 | Y (A7) | NDUFA7 | polymer | 136 | 16358.7 | 1 | Euglena gracilis | ||
| 26 | Z (A8) | NDUFA8 | polymer | 223 | 25916.3 | 1 | Euglena gracilis | ||
| 27 | AA (A9) | NDUFA9 | polymer | 489 | 54983.1 | 1 | Euglena gracilis | ||
| 28 | BA (AB) | NDUFAB1-alpha | polymer | 134 | 14936.1 | 1 | Euglena gracilis | ||
| 29 | CA (AC) | NDUFAB1-beta | polymer | 134 | 14899.1 | 1 | Euglena gracilis | ||
| 30 | DA (AL) | NDUFA12 | polymer | 281 | 33338.1 | 1 | Euglena gracilis | ||
| 31 | EA (AM) | NDUFA13 | polymer | 198 | 22683.8 | 1 | Euglena gracilis | ||
| 32 | FA (AN) | NDUFA11 | polymer | 287 | 32617.5 | 1 | Euglena gracilis | ||
| 33 | GA (B2) | NDUFB2 | polymer | 145 | 17202.4 | 1 | Euglena gracilis | ||
| 34 | HA (B3) | NDUFB3 | polymer | 62 | 6831.1 | 1 | Euglena gracilis | ||
| 35 | IA (B4) | NDUFB4 | polymer | 171 | 19511.4 | 1 | Euglena gracilis | ||
| 36 | JA (B5) | NDUFB5 | polymer | 140 | 15815.0 | 1 | Euglena gracilis | ||
| 37 | KA (B6) | NDUFB6 | polymer | 91 | 10926.6 | 1 | Euglena gracilis | ||
| 38 | LA (B7) | NDUFB7 | polymer | 97 | 12247.1 | 1 | Euglena gracilis | ||
| 39 | MA (B8) | NDUFB8 | polymer | 176 | 20488.5 | 1 | Euglena gracilis | ||
| 40 | NA (B9) | NDUFB9 | polymer | 158 | 18347.0 | 1 | Euglena gracilis | ||
| 41 | OA (BL) | NDUFB10 | polymer | 144 | 17471.0 | 1 | Euglena gracilis | ||
| 42 | PA (BM) | NDUFB11 | polymer | 112 | 13048.7 | 1 | Euglena gracilis | ||
| 43 | QA (C1) | Cytochrome c oxidase subunit 1 | polymer | 495 | 55759.5 | 1 | UniProt (Q34463) Pfam (PF00115) | Euglena gracilis | |
| 44 | RA (C2) | Cytochrome c oxidase subunit 2 | polymer | 196 | 22443.4 | 1 | UniProt (Q9XN19) Pfam (PF02790) Pfam (PF00116) | Euglena gracilis | |
| 45 | SA (C3) | Putative NADH dehydrogenase subunit 6 | polymer | 161 | 19414.9 | 1 | UniProt (Q9XN18) | Euglena gracilis | |
| 46 | TA (C4) | NDUFC2 | polymer | 185 | 22010.1 | 1 | Euglena gracilis | ||
| 47 | UA (DC) | COX4 | polymer | 179 | 20427.5 | 1 | Euglena gracilis | ||
| 48 | VA (E1) | NDUEG1 | polymer | 483 | 53352.0 | 1 | Euglena gracilis | ||
| 49 | WA (E2) | NDUEG2 | polymer | 472 | 51015.9 | 1 | Euglena gracilis | ||
| 50 | XA (E3) | NDUEG3 | polymer | 594 | 63097.0 | 1 | Euglena gracilis | ||
| 51 | YA (E4) | NDUEG4 | polymer | 368 | 41313.4 | 1 | Euglena gracilis | ||
| 52 | ZA (E5) | NDUEG5 | polymer | 290 | 29182.7 | 1 | Euglena gracilis | ||
| 53 | AB (E6) | NDUEG6 | polymer | 371 | 43669.5 | 1 | Euglena gracilis | ||
| 54 | BB (E7) | NDUEG7 | polymer | 246 | 26818.8 | 1 | Euglena gracilis | ||
| 55 | CB (E8) | NDUEG8 | polymer | 205 | 23994.7 | 1 | Euglena gracilis | ||
| 56 | DB (E9) | NDUEG9 | polymer | 178 | 18272.9 | 1 | Euglena gracilis | ||
| 57 | EB (EA) | NDUEG10 | polymer | 126 | 14140.6 | 1 | Euglena gracilis | ||
| 58 | FB (EB) | NDUEG11 | polymer | 101 | 11472.2 | 1 | Euglena gracilis | ||
| 59 | GB (EC) | NDUEG11 | polymer | 101 | 11323.1 | 1 | Euglena gracilis | ||
| 60 | HB (ED) | NDUEG13 | polymer | 151 | 17731.4 | 1 | Euglena gracilis | ||
| 61 | IB (FX) | NDUFX | polymer | 325 | 37197.0 | 1 | Euglena gracilis | ||
| 62 | JB (G1) | NDUCA1 | polymer | 436 | 48726.9 | 1 | Euglena gracilis | ||
| 63 | KB (G2) | NDUCA2 | polymer | 267 | 28858.0 | 1 | Euglena gracilis | ||
| 64 | LB (G3) | NDUCA3 | polymer | 261 | 28016.9 | 1 | Euglena gracilis | ||
| 65 | MB (N1) | ND1 | polymer | 670 | 79682.8 | 1 | Euglena gracilis | ||
| 66 | NB (N2) | ND2a | polymer | 300 | 35864.4 | 1 | Euglena gracilis | ||
| 67 | OB, RB (N3, N6) | ND3 | polymer | 293 | 34504.2 | 2 | Euglena gracilis | ||
| 68 | PB (N4) | NADH-ubiquinone oxidoreductase chain 4 | polymer | 478 | 56417.3 | 1 | UniProt (A0A0S2YRV6) Pfam (PF00361) | Euglena gracilis | |
| 69 | QB (N5) | ND5 | polymer | 584 | 68375.4 | 1 | Euglena gracilis | ||
| 70 | DC, SB (QA, Qa) | MPP-beta | polymer | 479 | 53520.3 | 2 | Euglena gracilis | ||
| 71 | EC, TB (QB, Qb) | Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial | polymer | 474 | 51132.7 | 2 | UniProt (P43265) Pfam (PF00675) | Euglena gracilis | |
| 72 | FC, UB (QC, Qc) | Cytochrome b | polymer | 368 | 42476.3 | 2 | UniProt (A0A0S2YRT7) Pfam (PF00033) Pfam (PF00032) | Euglena gracilis | |
| 73 | GC, VB (QD, Qd) | Cytochrome c1, heme protein | polymer | 243 | 27889.4 | 2 | UniProt (P20114) Pfam (PF02167) | Euglena gracilis | Complex III subunit 4,Complex III subunit IV,Cytochrome b-c1 complex subunit 4,Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit,Cytochrome c-1 |
| 74 | HC, WB (QE, Qe) | UQCRFS1 | polymer | 252 | 27825.9 | 2 | Euglena gracilis | ||
| 75 | IC, XB (QF, Qf) | UQCRH | polymer | 72 | 8207.6 | 2 | Euglena gracilis | ||
| 76 | JC, YB (QG, Qg) | UQCRB | polymer | 228 | 27404.1 | 2 | Euglena gracilis | ||
| 77 | KC, ZB (QH, Qh) | UQCRQ | polymer | 85 | 9948.4 | 2 | Euglena gracilis | ||
| 78 | AC, LC (QI, Qi) | UQCR9 | polymer | 70 | 6939.4 | 2 | Euglena gracilis | ||
| 79 | BC, MC (QJ, Qj) | UQCR10 | polymer | 154 | 17577.3 | 2 | Euglena gracilis | ||
| 80 | CC, NC (QK, Qk) | Ubiquinol-cytochrome-C reductase complex subunit IX, mitochondrial | polymer | 100 | 11300.4 | 2 | UniProt (P43266) | Euglena gracilis | |
| 81 | OC (S2) | NDUFS2 | polymer | 395 | 45251.9 | 1 | Euglena gracilis | ||
| 82 | PC (S3) | NDUFS3 | polymer | 277 | 32466.7 | 1 | Euglena gracilis | ||
| 83 | QC (S4) | NDUFS4 | polymer | 208 | 23736.9 | 1 | Euglena gracilis | ||
| 84 | RC (S5) | NDUFS5 | polymer | 122 | 14244.0 | 1 | Euglena gracilis | ||
| 85 | SC (S6) | NDUFS6 | polymer | 147 | 17101.7 | 1 | Euglena gracilis | ||
| 86 | TC (S7) | NDUFS7 | polymer | 207 | 22837.3 | 1 | Euglena gracilis | ||
| 87 | UC (S8) | NDUFS8 | polymer | 212 | 24370.0 | 1 | Euglena gracilis | ||
| 88 | VC (V1) | NDUFV1 | polymer | 526 | 57940.2 | 1 | Euglena gracilis | ||
| 89 | WC (V2) | NDUFV2 | polymer | 225 | 25189.1 | 1 | Euglena gracilis | ||
| 90 | XC, YC (A, B) | poly(UNK) | polymer | 12 | 1039.3 | 2 | Euglena gracilis | ||
| 91 | JG, KH, XG, ZC (QE, V2, Qe, 1A) | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 4 | Chemie (FES) | |||
| 92 | AD, BD, FH, GH, HH... (1A, S7, S8, V1) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 6 | Chemie (SF4) | |||
| 93 | CD (1A) | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
| 94 | AH, BF, CE, CH, DD... (Qg, E4, AM, Qj, 4A...) | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE | non-polymer | 790.1 | 41 | Chemie (PC1) | |||
| 95 | AG, FD, GD, GE, JF... (N5, 4D, B4, E9, 7A...) | 1,2-Distearoyl-sn-glycerophosphoethanolamine | non-polymer | 748.1 | 9 | Chemie (3PE) | |||
| 96 | HD (4D) | O-[(S)-hydroxy{[(2S)-2-hydroxy-3-(octadec-9-enoyloxy)propyl]oxy}phosphoryl]-L-serine | non-polymer | 523.6 | 1 | Chemie (S12) | |||
| 97 | AE, AF, BE, BG, BH... (AM, E4, N5, Qh, E6...) | CARDIOLIPIN | non-polymer | 1464.0 | 31 | Chemie (CDL) | |||
| 98 | EF, EH, KD (E7, S6, 5B) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
| 99 | RD (A9) | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 745.4 | 1 | Chemie (NDP) | |||
| 100 | VD, WD (AB, AC) | S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate | non-polymer | 568.7 | 2 | Chemie (ZMP) | |||
| 101 | ME, NE (C1) | HEME-A | non-polymer | 852.8 | 2 | Chemie (HEA) | |||
| 102 | OE, UE, VE (C1, C2) | COPPER (II) ION | non-polymer | 63.5 | 3 | Chemie (CU) | |||
| 103 | PE (C1) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 104 | NG, OG, TE (QJ, C2) | 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE | non-polymer | 535.7 | 3 | Chemie (PX2) | |||
| 105 | XF (N4) | UBIQUINONE-10 | non-polymer | 863.3 | 1 | Chemie (U10) | |||
| 106 | CG, DG, RG, SG (QC, Qc) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 4 | Chemie (HEM) | |||
| 107 | GG, VG (QD, Qd) | HEME C | non-polymer | 618.5 | 2 | Chemie (HEC) | |||
| 108 | IH (V1) | FLAVIN MONONUCLEOTIDE | non-polymer | 456.3 | 1 | Chemie (FMN) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 103 |
| Total formula weight | 2782293.6 | |
| Non-Polymers* | Number of molecules | 116 |
| Total formula weight | 98519.0 | |
| All* | Total formula weight | 2880812.6 |
