8IN8
Cryo-EM structure of the target ssDNA-bound SIR2-APAZ/Ago-gRNA quaternary complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | B | Sir2 superfamily protein | polymer | 587 | 66645.9 | 1 | UniProt (Q74DF6) Pfam (PF13289) In PDB | Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) | |
2 | C | Piwi domain protein | polymer | 473 | 53325.6 | 1 | UniProt (Q74DF5) In PDB | Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) | |
3 | I | RNA (5'-R(P*AP*UP*AP*AP*UP*GP*GP*UP*UP*UP*CP*UP*UP*AP*GP*AP*CP*GP*UP*CP*GP*UP*UP*U)-3') | polymer | 24 | 7610.5 | 1 | Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) | ||
4 | J | DNA (5'-D(P*AP*AP*CP*GP*AP*CP*GP*TP*CP*TP*AP*AP*GP*AP*AP*AP*CP*CP*AP*TP*TP*AP*A)-3') | polymer | 23 | 7050.6 | 1 | Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) | ||
5 | I | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 134632.6 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 24.3 | |
All* | Total formula weight | 134656.9 |