8I3P
crystal structure of yeast cytosine deaminase mutant yCD-RQ-1/8SAH in complex with (R)-4-hydroxy-3,4-dihydropyrimidin-2(1H)-one
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Cytosine deaminase | polymer | 198 | 22764.9 | 2 | UniProt (Q12178) Pfam (PF00383) | Saccharomyces cerevisiae S288C | yCD,Cytosine aminohydrolase,Fluorocytosine resistance protein 1 |
| 2 | C, F (A, B) | 4-oxidanyl-3,4-dihydro-1H-pyrimidin-2-one | non-polymer | 114.1 | 2 | Chemie (OS0) | |||
| 3 | D, G (A, B) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 4 | E, H (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 5 | I, J (A, B) | water | water | 18.0 | 349 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 158 (UniProt: Q12178)
| PDB | External Database | Details |
|---|---|---|
| Gly 0 | - | expression tag |
| Arg 159 | - | expression tag |
| Ile 160 | - | expression tag |
| Glu 161 | - | expression tag |
| Leu 162 | - | expression tag |
| Gln 163 | - | expression tag |
| Lys 164 | - | expression tag |
| Gln 165 | - | expression tag |
| Gln 166 | - | expression tag |
| Glu 167 | - | expression tag |
| Glu 168 | - | expression tag |
| Glu 169 | - | expression tag |
| Ala 170 | - | expression tag |
| Glu 171 | - | expression tag |
| Arg 172 | - | expression tag |
| Leu 173 | - | expression tag |
| Arg 174 | - | expression tag |
| Arg 175 | - | expression tag |
| Ile 176 | - | expression tag |
| Gln 177 | - | expression tag |
| Glu 178 | - | expression tag |
| Glu 179 | - | expression tag |
| Met 180 | - | expression tag |
| Glu 181 | - | expression tag |
| Lys 182 | - | expression tag |
| Glu 183 | - | expression tag |
| Arg 184 | - | expression tag |
| Lys 185 | - | expression tag |
| Arg 186 | - | expression tag |
| Arg 187 | - | expression tag |
| Glu 188 | - | expression tag |
| Glu 189 | - | expression tag |
| Asp 190 | - | expression tag |
| Glu 191 | - | expression tag |
| Gln 192 | - | expression tag |
| Arg 193 | - | expression tag |
| Arg 194 | - | expression tag |
| Arg 195 | - | expression tag |
| Lys 196 | - | expression tag |
| Glu 197 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 45529.7 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 483.2 | |
| All* | Total formula weight | 46012.9 |






