8HN4
Complex structure of HLA2402 with recognizing SARS-CoV-2 epitope QYIKWPWYI
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | MHC class I antigen | polymer | 308 | 35437.1 | 1 | UniProt (F6IR24) Pfam (PF00129) Pfam (PF07654) In PDB | Homo sapiens (human) | |
2 | B | Beta-2-microglobulin | polymer | 100 | 11879.4 | 1 | UniProt (P61769) Pfam (PF07654) In PDB | Homo sapiens (human) | |
3 | E | SARS-CoV-2 T-cell epitope QYIKWPWYI | polymer | 9 | 1297.5 | 1 | UniProt (by SIFTS) (P0DTC2) In PDB | Severe acute respiratory syndrome coronavirus 2 |
Sequence modifications
A: 25 - 300 (UniProt: F6IR24)
B: 1 - 99 (UniProt: P61769)
PDB | External Database | Details |
---|---|---|
Met 20 | - | initiating methionine |
Asn 21 | - | expression tag |
Ser 22 | - | expression tag |
Val 23 | - | expression tag |
Asp 24 | - | expression tag |
Gly 301 | - | expression tag |
Ser 302 | - | expression tag |
Gly 303 | - | expression tag |
Leu 304 | - | expression tag |
Asn 305 | - | expression tag |
Asp 306 | - | expression tag |
Ile 307 | - | expression tag |
Phe 308 | - | expression tag |
Glu 309 | - | expression tag |
Ala 310 | - | expression tag |
Gln 311 | - | expression tag |
Lys 312 | - | expression tag |
Ile 313 | - | expression tag |
Glu 314 | - | expression tag |
Trp 315 | - | expression tag |
His 316 | - | expression tag |
Ala 317 | - | expression tag |
Ala 318 | - | expression tag |
Ala 319 | - | expression tag |
Leu 320 | - | expression tag |
Glu 321 | - | expression tag |
His 322 | - | expression tag |
His 323 | - | expression tag |
His 324 | - | expression tag |
His 325 | - | expression tag |
His 326 | - | expression tag |
His 327 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 48613.9 | |
All* | Total formula weight | 48613.9 |