8H68
Crystal structure of Caenorhabditis elegans NMAD-1 in complex with NOG and Mg(II)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Maltose/maltodextrin-binding periplasmic protein,DNA N6-methyl adenine demethylase | polymer | 634 | 70953.3 | 1 | UniProt (P0AEY0) UniProt (Q8MNT9) Pfam (PF01547) UniProt (by SIFTS) (P0AEX9) | Escherichia coli | MMBP,Maltodextrin-binding protein,Maltose-binding protein,MBP,N6-methyl adenine demethylase 1 |
| 2 | B (C) | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 666.6 | 1 | In PDB BIRD (PRD_900010) GlyTouCan (G87171PZ) | |||
| 3 | C (A) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 1 | Chemie (TRS) | |||
| 4 | D (A) | GLYCINE | non-polymer | 75.1 | 1 | Chemie (GLY) | |||
| 5 | E (A) | N-OXALYLGLYCINE | non-polymer | 147.1 | 1 | Chemie (OGA) | |||
| 6 | F (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 7 | G (A) | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 1 | Chemie (EPE) | |||
| 8 | H (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 9 | I (A) | water | water | 18.0 | 197 | Chemie (HOH) |
Sequence modifications
A: -371 - -6 (UniProt: P0AEY0)
A: 32 - 291 (UniProt: Q8MNT9)
| PDB | External Database | Details |
|---|---|---|
| Gly -373 | - | expression tag |
| Ser -372 | - | expression tag |
| Asn -5 | - | linker |
| Ala -4 | - | linker |
| Ala -3 | - | linker |
| Ala -2 | - | linker |
| Leu 30 | - | linker |
| Glu 31 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 70953.3 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 666.6 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 713.0 | |
| All* | Total formula weight | 72332.9 |
