8H5D
Crystal structure of YojK mutant in complex with UDP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Glycosyltransferase | polymer | 414 | 47012.1 | 2 | UniProt (O31853) Pfam (PF06722) | Bacillus subtilis | |
| 2 | C, E (A, B) | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 2 | Chemie (UDP) | |||
| 3 | D (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 4 | F, G (A, B) | water | water | 18.0 | 246 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 405 (UniProt: O31853)
| PDB | External Database | Details |
|---|---|---|
| Glu 158 | Ser 158 | engineered mutation |
| His 218 | Ala 218 | engineered mutation |
| Thr 241 | Ile 241 | engineered mutation |
| Asn 327 | Gly 327 | engineered mutation |
| Lys 369 | Ala 369 | engineered mutation |
| Ala 406 | - | expression tag |
| Leu 407 | - | expression tag |
| Glu 408 | - | expression tag |
| His 409 | - | expression tag |
| His 410 | - | expression tag |
| His 411 | - | expression tag |
| His 412 | - | expression tag |
| His 413 | - | expression tag |
| His 414 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 94024.3 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 900.4 | |
| All* | Total formula weight | 94924.7 |
