8GZ2
Cryo-EM structure of human NaV1.6/beta1/beta2-4,9-anhydro-tetrodotoxin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (D) | Sodium channel subunit beta-1 | polymer | 218 | 24732.1 | 1 | UniProt (Q07699) Pfam (PF07686) | Homo sapiens (human) | |
| 2 | B (B) | Sodium channel protein type 8 subunit alpha | polymer | 1980 | 225520.6 | 1 | UniProt (Q9UQD0) Pfam (PF00520) Pfam (PF11933) Pfam (PF06512) Pfam (PF24609) | Homo sapiens (human) | Sodium channel protein type VIII subunit alpha,Voltage-gated sodium channel subunit alpha Nav1.6 |
| 3 | C (C) | Sodium channel subunit beta-2 | polymer | 215 | 24355.9 | 1 | UniProt (O60939) Pfam (PF07686) | Homo sapiens (human) | |
| 4 | D, E, F, G, H (A, E, F, G, H) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 5 | In PDB GlyTouCan (G15407YE) | |||
| 5 | I, J (D, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 6 | K (B) | (1R,2S,3S,4R,5R,9S,11S,12S,14R)-7-amino-2,4,12-trihydroxy-2-(hydroxymethyl)-10,13,15-trioxa-6,8-diazapentacyclo[7.4.1.1~3,12~.0~5,11~.0~5,14~]pentadec-7-en-8-ium (non-preferred name) | non-polymer | 301.3 | 1 | Chemie (WMK) PubChem (23350328) PubChem (25199634) PubChem (59509171) PubChem (13992062) PubChem (107878) PubChem (101758149) PubChem (11507706) PubChem (10286310) PubChem (124201860) PubChem (11243537) PubChem (11500416) PubChem (11536757) PubChem (13992063) PubChem (13992064) PubChem (13992067) PubChem (13992068) PubChem (146156897) PubChem (171761687) PubChem (163189502) PubChem (166636640) PubChem (175613399) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 274608.6 | |
| Branched | Number of molecules | 5 |
| Total formula weight | 2932.7 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 743.7 | |
| All* | Total formula weight | 278285.0 |






