8G2Z
48-nm doublet microtubule from Tetrahymena thermophila strain CU428
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | 0A, 1A, 2A, 3A | RIB27A | polymer | 236 | 27605.6 | 4 | UniProt (I7LUL4) In PDB | Tetrahymena thermophila | |
2 | 0B | RIB38 | polymer | 329 | 38205.6 | 1 | UniProt (Q23JL9) In PDB | Tetrahymena thermophila | |
3 | 0C, 1C | CFAM166B | polymer | 156 | 17705.8 | 2 | UniProt (Q235M9) Pfam (PF10629) In PDB | Tetrahymena thermophila | |
4 | 0D, 1D, 2D | CFAM166A | polymer | 225 | 25750.8 | 3 | UniProt (Q238X3) Pfam (PF10629) In PDB | Tetrahymena thermophila | |
5 | 0E, 1E, 2E, 3E | RIB22 | polymer | 191 | 22401.1 | 4 | UniProt (I7LT67) Pfam (PF13499) In PDB | Tetrahymena thermophila | |
6 | 0F | CFAM166C | polymer | 219 | 25069.3 | 1 | UniProt (Q22B75) In PDB | Tetrahymena thermophila | |
7 | 0G, 1G | CFAP107 | polymer | 183 | 21298.0 | 2 | UniProt (Q237T1) In PDB | Tetrahymena thermophila | |
8 | 0H, 1H | CFAP127 | polymer | 447 | 55558.0 | 2 | UniProt (I7LV70) Pfam (PF13868) In PDB | Tetrahymena thermophila | |
9 | 0N, 1N, 2N | CFAP161A | polymer | 492 | 57489.6 | 3 | UniProt (Q22WJ6) In PDB | Tetrahymena thermophila | |
10 | 0Q, 1Q, 2Q, 3Q, 4Q... | CFAP20 | polymer | 195 | 22976.5 | 7 | UniProt (Q22NU3) Pfam (PF05018) In PDB | Tetrahymena thermophila | |
11 | 0S, 1S, 2S, 3S | Parkin co-regulated protein PACRGA | polymer | 319 | 36304.8 | 4 | UniProt (I7MLV6) Pfam (PF10274) In PDB | Tetrahymena thermophila | |
12 | 0T, 1T, 2T, 3T | IJ34 | polymer | 298 | 34434.1 | 4 | UniProt (I7M9T0) Pfam (PF14908) Pfam (PF18289) In PDB | Tetrahymena thermophila | |
13 | 0U, 1U, 2U, 3U | CFAP52A | polymer | 656 | 73429.1 | 4 | UniProt (Q22ZH2) Pfam (PF00400) In PDB | Tetrahymena thermophila | |
14 | 0V, 1V, 2V, 3V | DNA polymerase delta C4-type zinc-finger protein | polymer | 269 | 31493.8 | 4 | UniProt (I7M279) Pfam (PF13864) In PDB | Tetrahymena thermophila | CFAP106A |
15 | 0X, 1X, 2X, 3X, 4X | RIB43A protein | polymer | 142 | 17288.3 | 5 | UniProt (A4VDZ5) Pfam (PF05914) In PDB | Tetrahymena thermophila | RIB43A_S |
16 | 1B, 2B, 3B | RIB57 | polymer | 498 | 57580.9 | 3 | UniProt (I7ME23) Pfam (PF13499) Pfam (PF13833) In PDB | Tetrahymena thermophila | |
17 | 1F | CFAP182A | polymer | 173 | 20109.8 | 1 | UniProt (Q24BV4) Pfam (PF14892) In PDB | Tetrahymena thermophila | |
18 | 1I | CFAP143 | polymer | 263 | 30485.7 | 1 | UniProt (A4VD56) In PDB | Tetrahymena thermophila | |
19 | 1J | CFAP21A | polymer | 422 | 48502.4 | 1 | UniProt (I7MLS4) In PDB | Tetrahymena thermophila | |
20 | 1K, 2K | CFAP53 | polymer | 489 | 60717.8 | 2 | UniProt (Q23YQ8) Pfam (PF13868) In PDB | Tetrahymena thermophila | |
21 | 1L, 2L, 3L | CFAP115 | polymer | 940 | 110670.2 | 3 | UniProt (Q23KF9) In PDB | Tetrahymena thermophila | |
22 | 1M, 2M | Nucleoside diphosphate kinase | polymer | 372 | 42642.7 | 2 | UniProt (W7XGD1) Pfam (PF00334) In PDB | Tetrahymena thermophila | CFAP67 |
23 | 1O, 2O, 3O | Cilia- and flagella-associated protein 45 | polymer | 494 | 59580.4 | 3 | UniProt (W7XCX2) Pfam (PF13868) In PDB | Tetrahymena thermophila | CFAP45 |
24 | 1P, 2P | CFAP210 | polymer | 507 | 61707.1 | 2 | UniProt (Q23EX8) Pfam (PF13868) In PDB | Tetrahymena thermophila | |
25 | 1R, 2R, 3R | RIB72B | polymer | 516 | 60972.9 | 3 | UniProt (I7MCU1) Pfam (PF06565) In PDB | Tetrahymena thermophila | |
26 | 1W, 2W | Protofilament ribbon protein | polymer | 280 | 34224.4 | 2 | UniProt (Q240R7) Pfam (PF05914) In PDB | Tetrahymena thermophila | RIB43A_L |
27 | 2C, 3C, 4C | RIB35 | polymer | 300 | 34952.7 | 3 | UniProt (I7ME81) Pfam (PF13499) In PDB | Tetrahymena thermophila | |
28 | 2F | CFAP182B | polymer | 96 | 11702.1 | 1 | UniProt (I7MLW3) Pfam (PF14892) In PDB | Tetrahymena thermophila | |
29 | 2G | Flagellar FliJ protein | polymer | 99 | 12099.0 | 1 | UniProt (A4VCU8) Pfam (PF15104) In PDB | Tetrahymena thermophila | CFAP141 |
30 | 2H, 3H, 4H | RIB27B | polymer | 229 | 26270.0 | 3 | UniProt (Q22CT6) In PDB | Tetrahymena thermophila | |
31 | 2I, 3I | STPG2 | polymer | 293 | 33647.1 | 2 | UniProt (I7M2G0) Pfam (PF07004) In PDB | Tetrahymena thermophila | |
32 | 3D | RIB26 | polymer | 237 | 26114.9 | 1 | UniProt (Q232I6) Pfam (PF01738) In PDB | Tetrahymena thermophila | |
33 | 4F | CFAP129 | polymer | 276 | 31386.0 | 1 | UniProt (I7M9I4) In PDB | Tetrahymena thermophila | |
34 | 4R, 5R, 6R, 7R | Flagellar microtubule protofilament ribbon protein | polymer | 613 | 72643.7 | 4 | UniProt (I7M0S7) Pfam (PF06565) In PDB | Tetrahymena thermophila | RIB72A |
35 | 4S, 5S | Parkin co-regulated protein PACRGB | polymer | 249 | 28413.2 | 2 | UniProt (I7M317) Pfam (PF10274) In PDB | Tetrahymena thermophila | |
36 | 5A, 5B, 5C, 5D | OJ2 | polymer | 175 | 19931.4 | 4 | UniProt (Q236L2) In PDB | Tetrahymena thermophila | |
37 | 5E, 5F, 5G, 5H | CFAP77A | polymer | 247 | 28989.6 | 4 | UniProt (Q22WR6) Pfam (PF14825) In PDB | Tetrahymena thermophila | |
38 | 5I, 5J, 5K | OJ3 | polymer | 168 | 14315.6 | 3 | Tetrahymena thermophila | ||
39 | 6F | SB1 | polymer | 145 | 17793.8 | 1 | UniProt (Q231B2) In PDB | Tetrahymena thermophila | |
40 | 6G | STPG1A | polymer | 364 | 42132.3 | 1 | UniProt (Q24GM1) Pfam (PF07004) In PDB | Tetrahymena thermophila | |
41 | 6H | Nebulin | polymer | 518 | 61047.6 | 1 | UniProt (Q231B6) In PDB | Tetrahymena thermophila | |
42 | 8L, 8N | B5B6_fMIP | polymer | 507 | 43166.2 | 2 | Tetrahymena thermophila | ||
43 | 8P | CFAP112A | polymer | 529 | 45038.6 | 1 | Tetrahymena thermophila | ||
44 | 8R | B2B3_fMIP | polymer | 361 | 31099.1 | 1 | Tetrahymena thermophila | ||
45 | AA, AC, AE, AG, AI... | Tubulin alpha chain | polymer | 449 | 49639.0 | 161 | UniProt (P41351) Pfam (PF00091) Pfam (PF03953) In PDB | Tetrahymena thermophila | Alpha-tubulin |
46 | AB, AD, AF, AH, AJ... | Tubulin beta chain | polymer | 443 | 49617.7 | 161 | UniProt (P41352) Pfam (PF00091) Pfam (PF03953) In PDB | Tetrahymena thermophila | Beta-tubulin |
47 | OF, PI, TE, CE, EG... | GUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 161 | Chemie (GTP) | |||
48 | SA, VK, BK, GN, KI... | MAGNESIUM ION | non-polymer | 24.3 | 161 | Chemie (MG) | |||
49 | NB, QL, UH, AH, DB... | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 161 | Chemie (GDP) |
Sequence modifications
0B: 1 - 329 (UniProt: Q23JL9)
0D, 1D, 2D: 1 - 225 (UniProt: Q238X3)
0G, 1G: 1 - 183 (UniProt: Q237T1)
0X, 1X, 2X, 3X, 4X: 1 - 142 (UniProt: A4VDZ5)
1J: 1 - 422 (UniProt: I7MLS4)
1L, 2L, 3L: 1 - 940 (UniProt: Q23KF9)
4F: 1 - 276 (UniProt: I7M9I4)
6H: 1 - 518 (UniProt: Q231B6)
PDB | External Database | Details |
---|---|---|
Thr 10 | Ser 10 | conflict |
Ala 11 | Thr 11 | conflict |
Leu 12 | Ala 12 | conflict |
Met 13 | Leu 13 | conflict |
Ser 36 | Thr 36 | conflict |
PDB | External Database | Details |
---|---|---|
Ala 86 | Thr 86 | conflict |
Glu 87 | Gln 87 | conflict |
PDB | External Database | Details |
---|---|---|
Ala 127 | Leu 127 | conflict |
Leu 128 | Ser 128 | conflict |
Ser 129 | Ala 129 | conflict |
Ala 130 | Ser 130 | conflict |
Ser 131 | Ala 131 | conflict |
Phe 140 | Tyr 140 | conflict |
PDB | External Database | Details |
---|---|---|
Ser 13 | Pro 13 | conflict |
Asp 14 | His 14 | conflict |
PDB | External Database | Details |
---|---|---|
Asp 322 | Asn 322 | conflict |
PDB | External Database | Details |
---|---|---|
Glu 863 | Gly 863 | conflict |
Ala 864 | Glu 864 | conflict |
PDB | External Database | Details |
---|---|---|
Val 70 | Asp 70 | conflict |
PDB | External Database | Details |
---|---|---|
His 186 | Gln 186 | conflict |
His 198 | Met 198 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 431 |
Total formula weight | 20198237.7 | |
Non-Polymers* | Number of molecules | 483 |
Total formula weight | 159500.4 | |
All* | Total formula weight | 20357738.1 |