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8FYL

Vilazodone-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AGuanine nucleotide-binding protein G(i) subunit alpha-1polymer35440415.01UniProt (P63096)
Pfam (PF00503)
In PDB
Homo sapiens (human)Adenylate cyclase-inhibiting G alpha protein
2BGuanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1polymer35839418.11UniProt (P62873)
Pfam (PF00400)
In PDB
Homo sapiens (human)Transducin beta chain 1
3GGuanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2polymer808506.81UniProt (P59768)
Pfam (PF00631)
In PDB
Homo sapiens (human)G gamma-I
4RSoluble cytochrome b562,5-hydroxytryptamine receptor 1A,5-hydroxytryptamine receptor 1Apolymer55261375.91UniProt (P08908)
Pfam (PF07361)
Pfam (PF00001)
UniProt (by SIFTS) (P0ABE7)
In PDB
Homo sapiens (human)5-HT-1A,5-HT1A,G-21,Serotonin receptor 1A
5R[(2R)-1-[oxidanyl-[(2R,3R,5S,6R)-2,3,5,6-tetrakis(oxidanyl)-4-phosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-3-tetradecanoyloxy-propan-2-yl] (5E,8E)-hexadeca-5,8,11,14-tetraenoatenon-polymer854.91Chemie (J40)
6R5-{4-[4-(5-cyano-1H-indol-3-yl)butyl]piperazin-1-yl}-1-benzofuran-2-carboxamidenon-polymer441.51Chemie (YG7)
7RCHOLESTEROL HEMISUCCINATEnon-polymer486.72Chemie (Y01)
Sequence modifications
B: 2 - 340 (UniProt: P62873)
PDBExternal DatabaseDetails
Met -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
Leu -10-expression tag
Glu -9-expression tag
Val -8-expression tag
Leu -7-expression tag
Phe -6-expression tag
Gln -5-expression tag
Gly -4-expression tag
Pro -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
Ser 0-expression tag
Gly 1-expression tag
G: 1 - 71 (UniProt: P59768)
PDBExternal DatabaseDetails
Gly 72-expression tag
Ser 73-expression tag
Ala 74-expression tag
Gly 75-expression tag
Ser 76-expression tag
Ala 77-expression tag
Gly 78-expression tag
Ser 79-expression tag
Ala 80-expression tag
R: -129 - 25 (PDB: 8FYL)
R: 26 - 422 (UniProt: P08908)
PDBExternal DatabaseDetails
Trp 125Leu 125engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight149715.8
Non-Polymers*Number of molecules4
Total formula weight2269.9
All*Total formula weight151985.7
*Water molecules are not included.

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PDB entries from 2024-08-14

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