Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8FRU

60S subunit of the Giardia lamblia 80S ribosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
60S ribosomal protein uL3polymer37942688.51UniProt (V6TF11)
Pfam (PF00297)
Giardia intestinalis assemblage ALSU ribosomal protein L3P
2B
(a)
60S ribosomal protein uL15polymer14917167.01UniProt (A8BZ78)
Pfam (PF00828)
Giardia intestinalis assemblage A
3C
(C)
60S ribosomal protein uL4polymer31635048.71UniProt (A8B7H8)
Pfam (PF00573)
Pfam (PF14374)
Giardia intestinalis assemblage A
4D
(I)
60S ribosomal protein uL16polymer21024283.21UniProt (A8BM86)
Pfam (PF00252)
Giardia intestinalis assemblage A
5E
(p)
60S ribosomal protein eL43polymer9410508.41UniProt (A8BN26)
Pfam (PF01780)
Giardia intestinalis assemblage A
6F
(D)
60S ribosomal protein uL18polymer29733961.41UniProt (E2RU47)
Pfam (PF17144)
Pfam (PF14204)
Giardia intestinalis assemblage A
7G
(H)
60S ribosomal protein uL6polymer18520889.41UniProt (A8BNT5)
Pfam (PF00347)
Giardia intestinalis assemblage A
8H
(G)
60S ribosomal protein eL8polymer22525427.71UniProt (A8BLL7)
Pfam (PF01248)
Giardia intestinalis assemblage A
9I
(J)
60S ribosomal protein uL5polymer17319767.71UniProt (A8BI95)
Pfam (PF00281)
Pfam (PF00673)
Giardia intestinalis assemblage A
10J
(O)
60S ribosomal protein uL13polymer19722921.91UniProt (A8BU75)
Pfam (PF00572)
Giardia intestinalis assemblage A
11K
(L)
60S ribosomal protein eL13polymer23426640.31UniProt (A8B6M8)Giardia intestinalis assemblage A
12L
(M)
60S ribosomal protein eL14polymer13114785.51UniProt (A8B4F8)
Pfam (PF01929)
Giardia intestinalis assemblage A
13M
(N)
60S ribosomal protein eL15polymer20424353.71UniProt (A8B8Z6)
Pfam (PF00827)
Giardia intestinalis assemblage A
14N
(Q)
60S ribosomal protein eL18polymer17920207.81UniProt (A8B4T7)
Pfam (PF17135)
Giardia intestinalis assemblage A
15O
(S)
60S ribosomal protein eL20polymer20524389.21UniProt (V6TB90)
Pfam (PF01775)
Giardia intestinalis assemblage A
16P
(R)
60S ribosomal protein eL19polymer19623199.21UniProt (A8BH61)
Pfam (PF01280)
Giardia intestinalis assemblage A
17Q
(T)
60S ribosomal protein eL21polymer15918296.41UniProt (A8B2Q4)
Pfam (PF01157)
Giardia intestinalis assemblage A
18R
(V)
60S ribosomal protein uL14polymer14215450.01UniProt (A8BS37)
Pfam (PF00238)
Giardia intestinalis assemblage A
19S
(P)
60S ribosomal protein uL22polymer16418722.81UniProt (A8BE76)
Pfam (PF00237)
Giardia intestinalis assemblage A
20T
(X)
60S ribosomal protein uL23polymer14116053.91UniProt (A8BMP6)
Pfam (PF03939)
Pfam (PF00276)
Giardia intestinalis assemblage A
21U
(Y)
60S ribosomal protein uL24polymer13515621.41UniProt (V6TD19)
Pfam (PF16906)
Giardia intestinalis assemblage A
22V
(W)
60S ribosomal protein eL24polymer10212005.21UniProt (A8BRH7)
Pfam (PF01246)
Giardia intestinalis assemblage A
23W
(Z)
60S ribosomal protein eL27polymer13515374.91UniProt (A8B1T3)
Pfam (PF00467)
Pfam (PF01777)
Giardia intestinalis assemblage A
24X
(b)
60S ribosomal protein eL29polymer627363.61UniProt (V6TAA6)
Pfam (PF01779)
Giardia intestinalis assemblage A
25Y
(h)
60S ribosomal protein uL29polymer12414316.31UniProt (A0A132NRN1)
Pfam (PF00831)
Giardia intestinalis assemblage A
26Z
(F)
60S ribosomal protein uL30polymer23527103.41UniProt (A8BRY6)
Pfam (PF00327)
Giardia intestinalis assemblage A
27AA
(d)
60S ribosomal protein eL31polymer10612184.11UniProt (A8BMP3)
Pfam (PF01198)
Giardia intestinalis assemblage A
28BA
(e)
60S ribosomal protein eL32polymer13615986.01UniProt (A8BMD9)
Pfam (PF01655)
Giardia intestinalis assemblage A
29CA
(g)
60S ribosomal protein eL34polymer12013528.81UniProt (A8BMF7)
Pfam (PF01199)
Giardia intestinalis assemblage A
30DA
(f)
60S ribosomal protein eL33polymer12313913.11UniProt (A8BKK5)
Pfam (PF01247)
Giardia intestinalis assemblage A
31EA
(i)
60S ribosomal protein eL36polymer9010586.71UniProt (A8BYA6)
Pfam (PF01158)
Giardia intestinalis assemblage A
32FA
(k)
60S ribosomal protein eL38polymer778605.11UniProt (A8B481)
Pfam (PF01781)
Giardia intestinalis assemblage A
33GA
(o)
60S ribosomal protein eL42polymer10612311.71UniProt (A8BQU8)
Pfam (PF00935)
Giardia intestinalis assemblage A
34HA
(U)
60S ribosomal protein eL22polymer17119942.41UniProt (A8BW84)
Pfam (PF01776)
UniProt (by SIFTS) (V6TJ98)
Giardia intestinalis assemblage A
35IA
(c)
60S ribosomal protein eL30polymer10911698.61UniProt (A8B5N7)
Pfam (PF01248)
Giardia intestinalis assemblage A
36JA
(j)
60S ribosomal protein eL37polymer10011473.31UniProt (V6TG99)
Pfam (PF01907)
Giardia intestinalis assemblage A
37KA
(l)
60S ribosomal protein eL39polymer516527.01Giardia intestinalis assemblage A
38LA
(m)
60S ribosomal protein eL40polymer12714343.71UniProt (A8BXE1)
Pfam (PF00240)
Pfam (PF01020)
Giardia intestinalis assemblage A
39MA
(A)
60S ribosomal protein uL2polymer25127090.51UniProt (E2RTN4)
Pfam (PF00181)
Pfam (PF03947)
Giardia intestinalis assemblage A
40NA
(n)
60S ribosomal protein eL41polymer252145.61Giardia intestinalis assemblage A
41OA
(3)
5S rRNApolymer12038672.01GenBank (1940868085)Giardia intestinalis assemblage A
42PA
(4)
5.8S rRNApolymer14145586.31GenBank (583967408)Giardia intestinalis assemblage A
43QA
(1)
28S rRNApolymer2687871348.81GenBank (2333213660)Giardia intestinalis assemblage A
44AC, AI, BC, CC, HB...
(1, B, A)
POTASSIUM IONnon-polymer39.127Chemie (K)
45AB, AD, AE, AF, AG...
(4, 1, a, V, P...)
MAGNESIUM IONnon-polymer24.3129Chemie (MG)
46VA, WA
(j, m)
ZINC IONnon-polymer65.42Chemie (ZN)
47AH, BH, CH, DH, EB...
(1, 4)
SODIUM IONnon-polymer23.033Chemie (NA)
48GB
(1)
SPERMIDINEnon-polymer145.21Chemie (SPD)
49AJ, BI, BJ, CI, CJ...
(e, B, g, a, f...)
waterwater18.03122Chemie (HOH)
Sequence modifications
4: 1 - 141 (GenBank: 583967408)
PDBExternal DatabaseDetails
C 138-insertion
1: 1 - 2687 (GenBank: 2333213660)
PDBExternal DatabaseDetails
U 1894-insertion
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains43
Total formula weight1682491.3
Non-Polymers*Number of molecules192
Total formula weight5225.7
All*Total formula weight1687717.0
*Water molecules are not included.

246704

PDB entries from 2025-12-24

PDB statisticsPDBj update infoContact PDBjnumon