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8FLB

Human nuclear pre-60S ribosomal subunit (State K2)

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1BA60S ribosomal protein L12polymer16517847.61UniProt (P30050)
Pfam (PF03946)
Pfam (PF00298)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL11
2L15.8S rRNApolymer15750463.81GenBank (555853)Homo sapiens (human)
3L328S rRNApolymer50701641203.81GenBank (86475748)Homo sapiens (human)
4L45S rRNApolymer12138998.11GenBank (23898)Homo sapiens (human)
5L560S ribosomal protein L11polymer17820288.51UniProt (P62913)
Pfam (PF00281)
Pfam (PF00673)
In PDB
Homo sapiens (human)CLL-associated antigen KW-12,Large ribosomal subunit protein uL5
6L660S ribosomal protein L13polymer21124321.71UniProt (P26373)
Pfam (PF01294)
In PDB
Homo sapiens (human)Breast basic conserved protein 1,Large ribosomal subunit protein eL13
7L760S ribosomal protein L13apolymer20323633.41UniProt (P40429)
Pfam (PF00572)
In PDB
Homo sapiens (human)23 kDa highly basic protein,Large ribosomal subunit protein uL13
8L860S ribosomal protein L14polymer21523485.01UniProt (P50914)
Pfam (PF01929)
In PDB
Homo sapiens (human)CAG-ISL 7,Large ribosomal subunit protein eL14
9L960S ribosomal protein L15polymer20424207.31UniProt (P61313)
Pfam (PF00827)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL15
10LA60S ribosomal protein L17polymer18421443.21UniProt (P18621)
Pfam (PF00237)
In PDB
Homo sapiens (human)60S ribosomal protein L23,Large ribosomal subunit protein uL22,PD-1
11LB60S ribosomal protein L18polymer18821687.71UniProt (Q07020)
Pfam (PF17135)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL18
12LC60S ribosomal protein L18apolymer17620808.51UniProt (Q02543)
Pfam (PF01775)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL20
13LD60S ribosomal protein L19polymer19623535.31UniProt (P84098)
Pfam (PF01280)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL19
14LE60S ribosomal protein L21polymer16018610.01UniProt (P46778)
Pfam (PF01157)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL21
15LF60S ribosomal protein L22polymer12814813.01UniProt (P35268)
Pfam (PF01776)
In PDB
Homo sapiens (human)EBER-associated protein,EAP,Epstein-Barr virus small RNA-associated protein,Heparin-binding protein HBp15,Large ribosomal subunit protein eL22
16LG60S ribosomal protein L23polymer14014892.51UniProt (P62829)
Pfam (PF00238)
In PDB
Homo sapiens (human)60S ribosomal protein L17,Large ribosomal subunit protein uL14
17LH60S ribosomal protein L23apolymer15617740.21UniProt (P62750)
Pfam (PF03939)
Pfam (PF00276)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL23
18LI60S ribosomal protein L26polymer14517303.41UniProt (P61254)
Pfam (PF16906)
Pfam (PF00467)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL24
19LJ60S ribosomal protein L27polymer13615835.81UniProt (P61353)
Pfam (PF00467)
Pfam (PF01777)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL27
20LK60S ribosomal protein L27apolymer14816604.51UniProt (P46776)
Pfam (PF00828)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL15
21LL60S ribosomal protein L28polymer13715784.61UniProt (P46779)
Pfam (PF01778)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL28
22LM60S ribosomal protein L29polymer15917804.31UniProt (P47914)
Pfam (PF01779)
In PDB
Homo sapiens (human)Cell surface heparin-binding protein HIP,Large ribosomal subunit protein eL29
23LN60S ribosomal protein L3polymer40346224.11UniProt (P39023)
Pfam (PF00297)
In PDB
Homo sapiens (human)HIV-1 TAR RNA-binding protein B,TARBP-B,Large ribosomal subunit protein uL3
24LO60S ribosomal protein L30polymer11512805.11UniProt (P62888)
Pfam (PF01248)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL30
25LP60S ribosomal protein L31polymer12514494.91UniProt (P62899)
Pfam (PF01198)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL31
26LQ60S ribosomal protein L32polymer13515898.91UniProt (P62910)
Pfam (PF01655)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL32
27LR60S ribosomal protein L34polymer11713326.11UniProt (P49207)
Pfam (PF01199)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL34
28LS60S ribosomal protein L35polymer12314593.61UniProt (P42766)
Pfam (PF00831)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL29
29LT60S ribosomal protein L35apolymer11012564.71UniProt (P18077)
Pfam (PF01247)
In PDB
Homo sapiens (human)Cell growth-inhibiting gene 33 protein,Large ribosomal subunit protein eL33
30LU60S ribosomal protein L36polymer10512290.91UniProt (Q9Y3U8)
Pfam (PF01158)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL36
31LV60S ribosomal protein L36apolymer10612477.01UniProt (J3KQN4)
Pfam (PF00935)
UniProt (by SIFTS) (P83881)
In PDB
Homo sapiens (human)
32LW60S ribosomal protein L37polymer9711111.01UniProt (P61927)
Pfam (PF01907)
In PDB
Homo sapiens (human)G1.16
33LX60S ribosomal protein L37apolymer9210299.41UniProt (P61513)
Pfam (PF01780)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL43
34LY60S ribosomal protein L38polymer708238.91UniProt (P63173)
Pfam (PF01781)
In PDB
Homo sapiens (human)
35LZ60S ribosomal protein L39polymer516426.81UniProt (P62891)
Pfam (PF00832)
In PDB
Homo sapiens (human)
36NKProtein LLP homologpolymer12915268.41UniProt (Q9BRT6)
Pfam (PF10169)
In PDB
Homo sapiens (human)Protein LAPS18-like
37NLRibosome biogenesis protein NOP53polymer47854498.41UniProt (Q9NZM5)
Pfam (PF07767)
In PDB
Homo sapiens (human)Glioma tumor suppressor candidate region gene 2 protein,Protein interacting with carboxyl terminus 1,PICT-1,p60
38NPZinc finger protein 593polymer13415230.21UniProt (O00488)
Pfam (PF12171)
In PDB
Homo sapiens (human)Zinc finger protein T86
39NRTranslation machinery-associated protein 16polymer20323992.41UniProt (Q96EY4)
Pfam (PF11176)
In PDB
Homo sapiens (human)
40SA60S ribosomal protein L4polymer42747804.61UniProt (P36578)
Pfam (PF00573)
Pfam (PF14374)
In PDB
Homo sapiens (human)60S ribosomal protein L1,Large ribosomal subunit protein uL4
41SB60S ribosomal protein L5polymer29734426.81UniProt (P46777)
Pfam (PF17144)
Pfam (PF14204)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL18
42SC60S ribosomal protein L6polymer28832810.21UniProt (Q02878)
Pfam (PF03868)
Pfam (PF01159)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL6,Neoplasm-related protein C140,Tax-responsive enhancer element-binding protein 107,TaxREB107
43SD60S ribosomal protein L7polymer24829291.01UniProt (P18124)
Pfam (PF08079)
Pfam (PF00327)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL30
44SE60S ribosomal protein L7apolymer26630061.81UniProt (P62424)
Pfam (PF01248)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL8,PLA-X polypeptide,Surfeit locus protein 3
45SF60S ribosomal protein L8polymer25728088.91UniProt (P62917)
Pfam (PF00181)
Pfam (PF03947)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL2
46SG60S ribosomal protein L9polymer19221899.51UniProt (P32969)
Pfam (PF00347)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL6
47SHMKI67 FHA domain-interacting nucleolar phosphoproteinpolymer29334285.31UniProt (Q9BYG3)
Pfam (PF00076)
Pfam (PF12196)
In PDB
Homo sapiens (human)Nucleolar phosphoprotein Nopp34,Nucleolar protein interacting with the FHA domain of pKI-67,hNIFK
48SI60S ribosomal protein L7-like 1polymer25529730.41UniProt (Q6DKI1)
Pfam (PF08079)
Pfam (PF00327)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL30-like 1
49SKEukaryotic translation initiation factor 6polymer24526620.01UniProt (P56537)
Pfam (PF01912)
In PDB
Homo sapiens (human)eIF-6,B(2)GCN homolog,B4 integrin interactor,CAB,p27(BBP)
50SMPescadillo homologpolymer58868114.71UniProt (O00541)
Pfam (PF06732)
Pfam (PF16589)
In PDB
Homo sapiens (human)
51SQmRNA turnover protein 4 homologpolymer23927602.51UniProt (Q9UKD2)
Pfam (PF00466)
Pfam (PF17777)
In PDB
Homo sapiens (human)Ribosome assembly factor MRTO4
52SRGTP-binding protein 4polymer63474107.81UniProt (Q9BZE4)
Pfam (PF17835)
Pfam (PF06858)
Pfam (PF08155)
In PDB
Homo sapiens (human)Chronic renal failure gene protein,GTP-binding protein NGB,Nucleolar GTP-binding protein 1
53SVProbable ribosome biogenesis protein RLP24polymer16319666.31UniProt (Q9UHA3)
Pfam (PF01246)
In PDB
Homo sapiens (human)Ribosomal L24 domain-containing protein 1,Ribosomal protein L24-like
54VBLeydig cell tumor 10 kDa protein homologpolymer9910605.71UniProt (Q9UNZ5)
Pfam (PF09495)
In PDB
Homo sapiens (human)
55L3, L1, L4, LG, LN...MAGNESIUM IONnon-polymer24.388Chemie (MG)
56LR, LV, LW, LX, NP...ZINC IONnon-polymer65.46Chemie (ZN)
57SRGUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
58SRPOTASSIUM IONnon-polymer39.11Chemie (K)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains54
Total formula weight2916168.3
Non-Polymers*Number of molecules96
Total formula weight3013.6
All*Total formula weight2919181.9
*Water molecules are not included.

224004

PDB entries from 2024-08-21

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