8FHY
Crystal structure of the SARS-CoV-2 receptor binding domain in complex with neutralizing antibody WRAIR-5021
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | I, A, D | Spike protein S1 | polymer | 205 | 23073.8 | 3 | UniProt (P0DTC2) Pfam (PF09408) In PDB | Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2 2019-nCoV COVID-19 virus) | |
2 | L, B, E | WRAIR-5021 Fab Light chain | polymer | 214 | 23356.9 | 3 | Macaca mulatta | ||
3 | H, C, F | WRAIR-5021 Fab Heavy chain | polymer | 220 | 23483.3 | 3 | Macaca mulatta | ||
4 | D, E, F, I, L... | GLYCEROL | non-polymer | 92.1 | 21 | Chemie (GOL) | |||
5 | D, I, A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
6 | D | MALONATE ION | non-polymer | 102.0 | 1 | Chemie (MLI) | |||
7 | water | water | 18.0 | 483 | Chemie (HOH) |
Sequence modifications
I, A, D: 331 - 527 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Gly 528 | - | expression tag |
Ser 529 | - | expression tag |
His 530 | - | expression tag |
His 531 | - | expression tag |
His 532 | - | expression tag |
His 533 | - | expression tag |
His 534 | - | expression tag |
His 535 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 9 |
Total formula weight | 209741.9 | |
Non-Polymers* | Number of molecules | 25 |
Total formula weight | 2699.6 | |
All* | Total formula weight | 212441.6 |