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8FDT

Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligasepolymer3126357459.11UniProt (Q14204)
UniProt (Q5SJX7)
Pfam (PF08393)
Pfam (PF03028)
Pfam (PF18198)
Pfam (PF18199)
Pfam (PF12774)
Pfam (PF17852)
Pfam (PF12775)
Pfam (PF22597)
Pfam (PF12780)
Pfam (PF12777)
Pfam (PF02403)
Pfam (PF12781)
Homo sapiens (human)Cytoplasmic dynein heavy chain 1,Dynein heavy chain,cytosolic,Seryl-tRNA synthetase,SerRS,Seryl-tRNA(Ser/Sec) synthetase
2B, C
(B, C)
Platelet-activating factor acetylhydrolase IB subunit betapolymer59866423.52UniProt (P43034)
Pfam (PF08513)
Pfam (PF00400)
Homo sapiens (human)Lissencephaly-1 protein,LIS-1,PAF acetylhydrolase 45 kDa subunit,PAF-AH 45 kDa subunit,PAF-AH alpha,PAFAH alpha
3D
(A)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (ATP)
4E, F, G
(A)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.23Chemie (ADP)
5H
(A)
VANADATE IONnon-polymer114.91Chemie (VO4)
Sequence modifications
A: 3 - 1822 (UniProt: Q14204)
PDBExternal DatabaseDetails
Gly 1-expression tag
Ser 2-expression tag
A: 1823 - 1889 (UniProt: Q5SJX7)
A: 1890 - 3124 (UniProt: Q14204)
PDBExternal DatabaseDetails
Glu 3125-expression tag
Phe 3126-expression tag
B, C: 3 - 411 (UniProt: P43034)
PDBExternal DatabaseDetails
Gly 1-expression tag
Ser 2-expression tag
B, C: 412 - 598 (PDB: 8FDT)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight490306.2
Non-Polymers*Number of molecules5
Total formula weight1903.7
All*Total formula weight492209.9
*Water molecules are not included.

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PDB entries from 2024-11-13

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