8EHO
PRRSV-1 PLP2 domain bound to ubiquitin
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E | Papain-like protease 2 | polymer | 204 | 22067.1 | 3 | UniProt (W0NX70) Pfam (PF05412) In PDB | Porcine reproductive and respiratory syndrome virus (PRRSV) | ORF1a |
2 | B, D, F | Ubiquitin | polymer | 75 | 8519.8 | 3 | UniProt (P0CG47) Pfam (PF00240) In PDB | Homo sapiens (human) | |
3 | A, C, E | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
4 | A, C, D, E | GLYCEROL | non-polymer | 92.1 | 7 | Chemie (GOL) | |||
5 | B, D, F | 3-AMINOPROPANE | non-polymer | 59.1 | 3 | Chemie (3CN) | |||
6 | B | NITRATE ION | non-polymer | 62.0 | 1 | Chemie (NO3) | |||
7 | water | water | 18.0 | 172 | Chemie (HOH) |
Sequence modifications
A, C, E: 385 - 578 (UniProt: W0NX70)
PDB | External Database | Details |
---|---|---|
Gly 579 | - | expression tag |
Ser 580 | - | expression tag |
Ser 581 | - | expression tag |
Gly 582 | - | expression tag |
His 583 | - | expression tag |
His 584 | - | expression tag |
His 585 | - | expression tag |
His 586 | - | expression tag |
His 587 | - | expression tag |
His 588 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 91760.7 | |
Non-Polymers* | Number of molecules | 14 |
Total formula weight | 1080.2 | |
All* | Total formula weight | 92840.9 |