8EDJ
Crystal structure of rA3G-ssRNA-GA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | DNA dC->dU-editing enzyme APOBEC-3G | polymer | 386 | 45144.5 | 1 | UniProt (M1GSK9) Pfam (PF18750) Pfam (PF18782) UniProt (by SIFTS) (Q7YR23) In PDB | Macaca mulatta (Rhesus monkey) | Deoxycytidine deaminase |
| 2 | R | RNA (5'-R(P*UP*GP*AP*UP*UP*U)-3') | polymer | 10 | 3078.8 | 1 | synthetic construct | ||
| 3 | A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 4 | A | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 5 | water | water | 18.0 | 330 | Chemie (HOH) |
Sequence modifications
A: 1 - 383 (UniProt: M1GSK9)
| PDB | External Database | Details |
|---|---|---|
| Gly -6 | - | expression tag |
| Pro -5 | - | expression tag |
| Gly -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Ala 139 | Cys 139 | conflict |
| Glu 140 | Gln 140 | conflict |
| Ala 141 | Lys 141 | conflict |
| Gly 142 | Arg 142 | conflict |
| - | Asp 143 | deletion |
| - | Gly 144 | deletion |
| - | Pro 145 | deletion |
| - | His 146 | deletion |
| Ala 259 | Glu 259 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 48223.3 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 226.9 | |
| All* | Total formula weight | 48450.1 |
