8ED4
Structure of the complex between the arsenite oxidase and its native electron acceptor cytochrome c552 from Pseudorhizobium sp. str. NT-26
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E, G | AroA | polymer | 844 | 93250.4 | 4 | UniProt (Q6VAL8) Pfam (PF18465) Pfam (PF00384) Pfam (PF01568) In PDB | Pseudorhizobium banfieldiae | Arsenite oxidase large subunit AioA [3Fe-4S] cluster,Mo-molybdopterin cofactor-binding active site |
2 | B, D, F, H | AroB | polymer | 162 | 17466.2 | 4 | UniProt (Q6VAL9) Pfam (PF00355) In PDB | Pseudorhizobium banfieldiae | |
3 | I, J, K, L | C-type cytochrome c552 | polymer | 117 | 12736.5 | 4 | UniProt (Q2TV05) Pfam (PF00034) In PDB | Pseudorhizobium banfieldiae | |
4 | E, G, A, C | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE | non-polymer | 740.6 | 8 | Chemie (MGD) | |||
5 | E, G, A, C | MOLYBDENUM(IV) ION | non-polymer | 95.9 | 4 | Chemie (4MO) | |||
6 | E, G, A, C | FE3-S4 CLUSTER | non-polymer | 295.8 | 4 | Chemie (F3S) | |||
7 | E, G, A, C | OXYGEN ATOM | non-polymer | 16.0 | 4 | Chemie (O) | |||
8 | F, H, B, D | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 4 | Chemie (FES) | |||
9 | L, I, J | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 3 | Chemie (HEM) | |||
10 | E | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
11 | E, G | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 2 | Chemie (PG4) | |||
12 | K | HEME C | non-polymer | 618.5 | 1 | Chemie (HEC) | |||
13 | water | water | 18.0 | 1749 | Chemie (HOH) |
Sequence modifications
B, D, F, H: 41 - 175 (UniProt: Q6VAL9)
I, J, K, L: 21 - 127 (UniProt: Q2TV05)
PDB | External Database | Details |
---|---|---|
His 14 | - | expression tag |
His 15 | - | expression tag |
His 16 | - | expression tag |
His 17 | - | expression tag |
His 18 | - | expression tag |
His 19 | - | expression tag |
Asp 20 | - | expression tag |
Tyr 21 | - | expression tag |
Asp 22 | - | expression tag |
Ile 23 | - | expression tag |
Pro 24 | - | expression tag |
Thr 25 | - | expression tag |
Thr 26 | - | expression tag |
Glu 27 | - | expression tag |
Asn 28 | - | expression tag |
Leu 29 | - | expression tag |
Tyr 30 | - | expression tag |
Phe 31 | - | expression tag |
Gln 32 | - | expression tag |
Gly 33 | - | expression tag |
Ala 34 | - | expression tag |
Met 35 | - | expression tag |
Gly 36 | - | expression tag |
Ser 37 | - | expression tag |
Gly 38 | - | expression tag |
Ile 39 | - | expression tag |
Gln 40 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 19 | - | initiating methionine |
Asp 20 | - | expression tag |
Leu 128 | - | expression tag |
Glu 129 | - | expression tag |
His 130 | - | expression tag |
His 131 | - | expression tag |
His 132 | - | expression tag |
His 133 | - | expression tag |
His 134 | - | expression tag |
His 135 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 493812.5 | |
Non-Polymers* | Number of molecules | 31 |
Total formula weight | 11207.2 | |
All* | Total formula weight | 505019.7 |