8E5T
Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | 5 | Ribosome biogenesis protein MAK21 | polymer | 1025 | 116832.4 | 1 | UniProt (Q12176) Pfam (PF03914) In PDB | Saccharomyces cerevisiae BY4741 | Maintenance of killer protein 21,Nucleolar complex protein 1 |
| 2 | 6 | NOC2 isoform 1 | polymer | 710 | 81719.3 | 1 | UniProt (A0A8H4BX61) Pfam (PF03715) UniProt (by SIFTS) (P39744) In PDB | Saccharomyces cerevisiae BY4741 | |
| 3 | C | 60S ribosomal protein L4-A | polymer | 362 | 39159.1 | 1 | UniProt (P10664) Pfam (PF00573) Pfam (PF14374) In PDB | Saccharomyces cerevisiae BY4741 | L2,Large ribosomal subunit protein uL4-A,RP2,YL2 |
| 4 | D | Protein MAK16 | polymer | 306 | 35754.6 | 1 | UniProt (P10962) Pfam (PF01778) Pfam (PF04874) In PDB | Saccharomyces cerevisiae BY4741 | Maintenance of killer protein 16 |
| 5 | E | 60S ribosomal protein L6-A | polymer | 176 | 20000.6 | 1 | UniProt (Q02326) Pfam (PF01159) In PDB | Saccharomyces cerevisiae BY4741 | L17,Large ribosomal subunit protein eL6-A,RP18,YL16 |
| 6 | F | 60S ribosomal protein L7-A | polymer | 244 | 27686.3 | 1 | UniProt (P05737) Pfam (PF08079) Pfam (PF00327) In PDB | Saccharomyces cerevisiae BY4741 | L6,Large ribosomal subunit protein uL30-A,RP11,YL8 |
| 7 | G | 60S ribosomal protein L8-A | polymer | 256 | 28175.8 | 1 | UniProt (P17076) Pfam (PF01248) In PDB | Saccharomyces cerevisiae BY4741 | L4,L4-2,L7a-1,Large ribosomal subunit protein eL8-A,Maintenance of killer protein 7,RP6,YL5 |
| 8 | K | Proteasome-interacting protein CIC1 | polymer | 376 | 42596.7 | 1 | UniProt (P38779) Pfam (PF00687) In PDB | Saccharomyces cerevisiae BY4741 | Core interacting component 1 |
| 9 | L | 60S ribosomal protein L13-A | polymer | 199 | 22604.2 | 1 | UniProt (Q12690) Pfam (PF01294) In PDB | Saccharomyces cerevisiae BY4741 | Large ribosomal subunit protein eL13-A |
| 10 | M | 60S ribosomal protein L14-A | polymer | 138 | 15195.1 | 1 | UniProt (P36105) Pfam (PF00467) Pfam (PF01929) In PDB | Saccharomyces cerevisiae BY4741 | Large ribosomal subunit protein eL14-A |
| 11 | N | 60S ribosomal protein L15-A | polymer | 204 | 24482.4 | 1 | UniProt (P05748) Pfam (PF00827) In PDB | Saccharomyces cerevisiae BY4741 | L13,Large ribosomal subunit protein eL15-A,RP15R,YL10,YP18 |
| 12 | Q | 60S ribosomal protein L18-A | polymer | 186 | 20609.3 | 1 | UniProt (P0CX49) Pfam (PF17135) In PDB | Saccharomyces cerevisiae BY4741 | Large ribosomal subunit protein eL18-A,RP28 |
| 13 | S | 60S ribosomal protein L20-A | polymer | 172 | 20478.9 | 1 | UniProt (P0CX23) Pfam (PF01775) In PDB | Saccharomyces cerevisiae BY4741 | L18a,Large ribosomal subunit protein eL20-A |
| 14 | b | Ribosome biogenesis protein BRX1 | polymer | 291 | 33585.4 | 1 | UniProt (Q08235) Pfam (PF04427) In PDB | Saccharomyces cerevisiae BY4741 | |
| 15 | e | 60S ribosomal protein L32 | polymer | 130 | 14809.4 | 1 | UniProt (P38061) Pfam (PF01655) In PDB | Saccharomyces cerevisiae BY4741 | Large ribosomal subunit protein eL32 |
| 16 | f | 60S ribosomal protein L33-A | polymer | 107 | 12177.1 | 1 | UniProt (P05744) Pfam (PF01247) In PDB | Saccharomyces cerevisiae BY4741 | L37,Large ribosomal subunit protein eL33-A,RP47,YL37 |
| 17 | i | 60S ribosomal protein L36-A | polymer | 100 | 11151.3 | 1 | UniProt (P05745) Pfam (PF01158) In PDB | Saccharomyces cerevisiae BY4741 | L39,Large ribosomal subunit protein eL36-A,YL39 |
| 18 | m | rRNA-processing protein EBP2 | polymer | 427 | 49842.6 | 1 | UniProt (P36049) Pfam (PF05890) In PDB | Saccharomyces cerevisiae BY4741 | EBNA1-binding protein homolog |
| 19 | n | Pescadillo homolog | polymer | 605 | 69984.1 | 1 | UniProt (P53261) Pfam (PF06732) Pfam (PF16589) In PDB | Saccharomyces cerevisiae BY4741 | Nucleolar protein 7,Ribosomal RNA-processing protein 13 |
| 20 | o | Ribosome biogenesis protein 15 | polymer | 220 | 25499.2 | 1 | UniProt (P53927) Pfam (PF00076) In PDB | Saccharomyces cerevisiae BY4741 | Nucleolar protein 15 |
| 21 | p | ATP-dependent RNA helicase HAS1 | polymer | 505 | 56798.3 | 1 | UniProt (Q03532) Pfam (PF00270) Pfam (PF00271) Pfam (PF13959) In PDB | Saccharomyces cerevisiae BY4741 | Helicase associated with SET1 protein 1 |
| 22 | s | Ribosome biogenesis protein ERB1 | polymer | 807 | 91830.6 | 1 | UniProt (Q04660) Pfam (PF08145) Pfam (PF00400) In PDB | Saccharomyces cerevisiae BY4741 | Eukaryotic ribosome biogenesis protein 1 |
| 23 | t | Ribosome biogenesis protein RLP7 | polymer | 322 | 36621.1 | 1 | UniProt (P40693) Pfam (PF00327) In PDB | Saccharomyces cerevisiae BY4741 | Ribosomal protein L7-like |
| 24 | z | Ribosomal RNA-processing protein 1 | polymer | 278 | 33250.5 | 1 | UniProt (P35178) Pfam (PF05997) In PDB | Saccharomyces cerevisiae BY4741 | |
| 25 | O | 60S ribosomal protein L16-A | polymer | 199 | 22247.2 | 1 | UniProt (P26784) Pfam (PF00572) In PDB | Saccharomyces cerevisiae BY4741 | L13a,L21,Large ribosomal subunit protein uL13-A,RP22,YL15 |
| 26 | 1 | 25S ribosomal RNA | polymer | 3396 | 1097493.9 | 1 | GenBank (2211412803) | Saccharomyces cerevisiae BY4741 | |
| 27 | 2 | 5.8S ribosomal RNA | polymer | 159 | 51012.1 | 1 | GenBank (1780004485) | Saccharomyces cerevisiae BY4741 | |
| 28 | 3 | ITS2 ribosomal RNA | polymer | 232 | 74308.4 | 1 | GenBank (1102641605) | Saccharomyces cerevisiae BY4741 | |
| 29 | 1, C, F | MAGNESIUM ION | non-polymer | 24.3 | 33 | Chemie (MG) | |||
| 30 | D | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 28 |
| Total formula weight | 2175905.8 | |
| Non-Polymers* | Number of molecules | 34 |
| Total formula weight | 867.5 | |
| All* | Total formula weight | 2176773.3 |
