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8E3O

E. coli 50S ribosome bound to solithromycin and VM1

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(I)
23S ribosomal RNApolymer2904941795.61Escherichia coli
2B
(J)
5S ribosomal RNApolymer11838177.81GenBank (1266940032)Escherichia coli
3C
(K)
50S ribosomal protein L2polymer27129663.21UniProt (P60422)
Pfam (PF00181)
Pfam (PF03947)
Escherichia coliLarge ribosomal subunit protein uL2
4D
(L)
50S ribosomal protein L15polymer14415008.51UniProt (A0A037Y8L6)
Pfam (PF00828)
UniProt (by SIFTS) (P02413)
Escherichia coli
5E
(M)
50S ribosomal protein L4polymer20122121.61UniProt (A0A7U9FY55)
Pfam (PF00573)
UniProt (by SIFTS) (P60723)
Escherichia coli
6F
(N)
50S ribosomal protein L3polymer20922277.51UniProt (P60438)
Pfam (PF00297)
Escherichia coliLarge ribosomal subunit protein uL3
7G
(O)
50S ribosomal protein L13polymer14216050.61UniProt (S1EW51)
Pfam (PF00572)
UniProt (by SIFTS) (P0AA10)
Escherichia coli
8H
(P)
50S ribosomal protein L22polymer11012253.41UniProt (P61175)
Pfam (PF00237)
Escherichia coliLarge ribosomal subunit protein uL22
9I
(Q)
50S ribosomal protein L32polymer566332.21UniProt (A0A828UBL8)
Pfam (PF01783)
UniProt (by SIFTS) (P0A7N4)
Escherichia coli
10J
(R)
50S ribosomal protein L34polymer465397.51UniProt (B7MGC4)
Pfam (PF00468)
UniProt (by SIFTS) (P0A7P5)
Escherichia coli
11K
(I)
(3aS,4R,7S,9R,10R,11R,13R,15R,15aR)-1-{4-[4-(3-aminophenyl)-1H-1,2,3-triazol-1-yl]butyl}-4-ethyl-7-fluoro-11-methoxy-3a ,7,9,11,13,15-hexamethyl-2,6,8,14-tetraoxotetradecahydro-2H-oxacyclotetradecino[4,3-d][1,3]oxazol-10-yl 3,4,6-trideoxy-3-(dimethylamino)-beta-D-xylo-hexopyranosidenon-polymer845.01Chemie (EM1)
12L
(I)
VIRGINIAMYCIN M1non-polymer525.61Chemie (VIR)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight1109077.8
Non-Polymers*Number of molecules2
Total formula weight1370.6
All*Total formula weight1110448.4
*Water molecules are not included.

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PDB entries from 2024-11-13

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