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8DXB

HIV-1 reverse transcriptase/rilpivirine with bound fragment 5-fluoroindole-2-carboxylic acid at the NNRTI Adjacent site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Reverse transcriptase/ribonuclease Hpolymer55763989.21UniProt (P03366)
Pfam (PF00078)
Pfam (PF06817)
Pfam (PF06815)
Pfam (PF00075)
Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)Exoribonuclease H, p66 RT
2B
(B)
p51 RTpolymer42850039.51UniProt (P03366)
Pfam (PF00078)
Pfam (PF06817)
Pfam (PF06815)
Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)
3C, D
(A)
5-fluoroindole-2-carboxylic acidnon-polymer179.12Chemie (FIC)
4E
(A)
4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrilenon-polymer366.41Chemie (T27)
5F, G, H, I, M...
(A, B)
DIMETHYL SULFOXIDEnon-polymer78.19Chemie (DMS)
6J, K, R
(A, B)
1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
7L
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
8S, T
(A, B)
waterwater18.0191Chemie (HOH)
Sequence modifications
A: 1 - 555 (UniProt: P03366)
PDBExternal DatabaseDetails
Met -1-expression tag
Val 0-expression tag
Ala 172Lys 771engineered mutation
Ala 173Lys 772engineered mutation
Ser 280Cys 879engineered mutation
B: 1 - 428 (UniProt: P03366)
PDBExternal DatabaseDetails
Ser 280Cys 879engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight114028.7
Non-Polymers*Number of molecules16
Total formula weight1638.4
All*Total formula weight115667.1
*Water molecules are not included.

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PDB entries from 2025-07-16

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