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8DWD

Adenine glycosylase MutY variant E43S in complex with DNA containing d(8-oxo-G) paired with an AP site generated by the enzyme acting on purine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AAdenine DNA glycosylasepolymer36541731.61UniProt (P83847)
Pfam (PF00730)
Pfam (PF00633)
Pfam (PF10576)
Pfam (PF14815)
In PDB
Geobacillus stearothermophilus
2BDNA (5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3')polymer113423.21synthetic construct
3CDNA (5'-D(*TP*GP*TP*CP*CP*AP*(ORP)P*GP*TP*CP*T)-3')polymer113207.11synthetic construct
4AIRON/SULFUR CLUSTERnon-polymer351.61Chemie (SF4)
5AACETATE IONnon-polymer59.01Chemie (ACT)
6ACALCIUM IONnon-polymer40.12Chemie (CA)
7waterwater18.0214Chemie (HOH)
Sequence modifications
A: 1 - 365 (UniProt: P83847)
PDBExternal DatabaseDetails
Ser 43Glu 43engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight48361.9
Non-Polymers*Number of molecules4
Total formula weight490.8
All*Total formula weight48852.7
*Water molecules are not included.

221716

PDB entries from 2024-06-26

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