8DUN
Cryo-EM Structure of Antibody SKW11 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, I, K (H, I, N) | Antibody SKW11 heavy chain | polymer | 231 | 24709.6 | 3 | Macaca fascicularis | ||
| 2 | B, J, L (L, M, O) | Antibody SKW11 light chain | polymer | 214 | 23317.8 | 3 | Macaca fascicularis | ||
| 3 | C, E, G (A, F, J) | Spike glycoprotein E1 | polymer | 489 | 52905.3 | 3 | UniProt (P13897) Pfam (PF01589) | Western equine encephalitis virus | |
| 4 | D, F, H (B, G, K) | Spike glycoprotein E2 | polymer | 408 | 45293.7 | 3 | UniProt (P13897) Pfam (PF00943) | Western equine encephalitis virus | E2 envelope glycoprotein |
| 5 | M, N (C, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 6 | O, P, Q, R, S... (A, B, F, G, J...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 7 | Chemie (NAG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 438679.7 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 848.8 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1548.5 | |
| All* | Total formula weight | 441076.9 |
