8DL2
BoGH13ASus from Bacteroides ovatus bound to acarbose
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Alpha amylase, catalytic domain protein | polymer | 738 | 84055.6 | 4 | UniProt (A7M087) Pfam (PF00128) In PDB | Bacteroides ovatus ATCC 8483 | |
2 | H, K | 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose | branched | 645.6 | 2 | ||||
3 | I, L, O, N, V... | 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 645.6 | 6 | BIRD (PRD_900007) | |||
4 | J | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 969.9 | 1 | BIRD (PRD_900007) | |||
5 | P | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 342.3 | 1 | ||||
6 | R | 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 483.5 | 1 | ||||
7 | M, S | alpha-D-glucopyranose-(1-4)-4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 807.7 | 2 | BIRD (PRD_900007) | |||
8 | A, B | alpha-D-glucopyranose | non-polymer | 180.2 | 2 | Chemie (GLC) | |||
9 | C, D, A, B | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
10 | B, A | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 2 | Chemie (PGE) | |||
11 | B, C, A | GLYCEROL | non-polymer | 92.1 | 6 | Chemie (GOL) | |||
12 | D, A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
13 | B, C, A | ACETATE ION | non-polymer | 59.0 | 3 | Chemie (ACT) | |||
14 | B, C, D, A | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
15 | B, D | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 2 | Chemie (PEG) | |||
16 | D | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
17 | water | water | 18.0 | 2276 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 22 - 758 (UniProt: A7M087)
PDB | External Database | Details |
---|---|---|
Gly 21 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 336222.5 | |
Branched | Number of molecules | 13 |
Total formula weight | 8576.0 | |
Non-Polymers* | Number of molecules | 26 |
Total formula weight | 2142.2 | |
All* | Total formula weight | 346940.8 |