8DL2
BoGH13ASus from Bacteroides ovatus bound to acarbose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-11 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.078 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 100.080, 125.310, 150.780 |
Unit cell angles | 90.00, 102.11, 90.00 |
Refinement procedure
Resolution | 38.600 - 1.990 |
R-factor | 0.1776 |
Rwork | 0.175 |
R-free | 0.21880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8dge |
RMSD bond length | 0.010 |
RMSD bond angle | 1.613 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.600 | 2.060 |
High resolution limit [Å] | 1.990 | 1.990 |
Rmerge | 0.086 | 1.050 |
Number of reflections | 244819 | 23974 |
<I/σ(I)> | 9.6 | |
Completeness [%] | 98.5 | |
Redundancy | 4.7 | |
CC(1/2) | 0.997 | 0.587 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 10 mM acarbose, 0.1 M HEPES/MOPS, pH 7.5, 0.12 monosaccharides mix (Glc, Man, Gal, Fuc, Xyl, GlcNAc), 20% ethylene glycol, 10% PEG8000 |