8DKC
P. gingivalis RNA Polymerase
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | DNA-directed RNA polymerase subunit alpha | polymer | 330 | 36838.1 | 2 | UniProt (Q7MTP0) Pfam (PF01193) Pfam (PF01000) Pfam (PF03118) | Porphyromonas gingivalis | RNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha |
2 | C (C) | DNA-directed RNA polymerase subunit beta | polymer | 1269 | 142524.6 | 1 | UniProt (A0A0E2LNT9) Pfam (PF04560) Pfam (PF04563) Pfam (PF04561) Pfam (PF04565) Pfam (PF10385) Pfam (PF00562) UniProt (by SIFTS) (Q7MX27) | Porphyromonas gingivalis | RNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta |
3 | D (D) | DNA-directed RNA polymerase subunit beta' | polymer | 1439 | 161311.8 | 1 | UniProt (T2NAX9) Pfam (PF04997) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF04998) UniProt (by SIFTS) (Q7MX26) | Porphyromonas gingivalis | RNAP subunit beta',RNA polymerase subunit beta',Transcriptase subunit beta' |
4 | E (E) | RNA polymerase Rpb6 | polymer | 110 | 12932.5 | 1 | UniProt (A0A134DNY2) Pfam (PF01192) UniProt (by SIFTS) (Q7MV73) | Porphyromonas gingivalis | RNA polymerase subunit omega |
Sequence modifications
C: 1 - 1269 (UniProt: A0A0E2LNT9)
D: 1 - 1433 (UniProt: T2NAX9)
E: 1 - 110 (UniProt: A0A134DNY2)
PDB | External Database | Details |
---|---|---|
Asp 224 | Glu 224 | conflict |
PDB | External Database | Details |
---|---|---|
Glu 1420 | Val 1420 | conflict |
His 1434 | - | expression tag |
His 1435 | - | expression tag |
His 1436 | - | expression tag |
His 1437 | - | expression tag |
His 1438 | - | expression tag |
His 1439 | - | expression tag |
PDB | External Database | Details |
---|---|---|
His 100 | Tyr 100 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 390445.0 | |
All* | Total formula weight | 390445.0 |