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8DEK

The structure of the glycopeptidase catalytic domain including the linker of Amuc_1438

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(B, A)
NPCBM/NEW2 domain-containing proteinpolymer44148664.02UniProt (A0A8F1DJZ3)
UniProt (by SIFTS) (B2UKY7)
Akkermansia muciniphila
2C, F
(B, A)
ZINC IONnon-polymer65.42Chemie (ZN)
3D
(B)
SODIUM IONnon-polymer23.01Chemie (NA)
4E
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
5G, H
(B, A)
waterwater18.060Chemie (HOH)
Sequence modifications
B, A: 19 - 458 (UniProt: A0A8F1DJZ3)
PDBExternal DatabaseDetails
Arg 18-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight97327.9
Non-Polymers*Number of molecules4
Total formula weight215.9
All*Total formula weight97543.8
*Water molecules are not included.

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PDB entries from 2024-11-13

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