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8DC8

Crystal structure of p53 Y220C covalently bound to azaindole KG13

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Cellular tumor antigen p53polymer22224753.91UniProt (P04637)
Pfam (PF00870)
Homo sapiens (human)Antigen NY-CO-13,Phosphoprotein p53,Tumor suppressor p53
2B
(A)
2-methyl-1-[(4P)-3-methyl-4-(2-methyl-1,2,3,4-tetrahydroisoquinolin-6-yl)-1H-pyrrolo[2,3-c]pyridin-1-yl]prop-2-en-1-one, bound formnon-polymer347.51Chemie (R50)
3C, D
(A)
SULFATE IONnon-polymer96.12Chemie (SO4)
4E
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
5F
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
6G
(A)
waterwater18.0196Chemie (HOH)
Sequence modifications
A: 94 - 312 (UniProt: P04637)
PDBExternal DatabaseDetails
Gly 91-expression tag
Ser 92-expression tag
Met 93-expression tag
Ser 124Cys 124conflict
Leu 133Met 133conflict
Ser 182Cys 182conflict
Cys 220Tyr 220engineered mutation
Ser 229Cys 229conflict
Tyr 239Asn 239conflict
Asp 268Asn 268conflict
Ser 275Cys 275conflict
Ser 277Cys 277conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight24753.9
Non-Polymers*Number of molecules5
Total formula weight629.3
All*Total formula weight25383.2
*Water molecules are not included.

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PDB entries from 2025-06-11

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