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8D5N

Crystal structure of Ld-HF10

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(C, A)
H-2 class I histocompatibility antigen, L-D alpha chainpolymer28232402.02UniProt (P01897)
Pfam (PF00129)
Pfam (PF07654)
Mus musculus (Mouse)
2B, D
(E, B)
Dense granule protein 6, HF10 peptidepolymer161567.62Toxoplasma gondii
3E, F
(F, H)
Beta-2-microglobulinpolymer10411975.62UniProt (P01887)
Pfam (PF07654)
Mus musculus (house mouse)
4G, J
(C, A)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
5H
(C)
TETRAETHYLENE GLYCOLnon-polymer194.21Chemie (PG4)
6I
(E)
PROPANOIC ACIDnon-polymer74.11Chemie (PPI)
7K, L
(F, H)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
8M, N, O, P, Q...
(C, E, A, B, F...)
waterwater18.0401Chemie (HOH)
Sequence modifications
C, A: 1 - 274 (UniProt: P01897)
PDBExternal DatabaseDetails
Cys 84Tyr 108conflict
Ser 121Cys 145conflict
Gln 275-expression tag
Ser 276-expression tag
Thr 277-expression tag
Arg 278-expression tag
Gly 279-expression tag
Gly 280-expression tag
Ala 281-expression tag
Ser 282-expression tag
F, H: 1 - 99 (UniProt: P01887)
PDBExternal DatabaseDetails
Gly -4-expression tag
Gly -3-expression tag
Ser -2-expression tag
Gly -1-expression tag
Gly 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight91890.5
Non-Polymers*Number of molecules6
Total formula weight834.9
All*Total formula weight92725.4
*Water molecules are not included.

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PDB entries from 2024-10-30

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