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8D32

Mycobacterium tuberculosis pduO-type ATP:cobalamin adenosyltransferase bound to 5-deoxyadenosylrhodibalamin and PPPi

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Corrinoid adenosyltransferasepolymer19320718.41UniProt (P9WP98)
Pfam (PF01923)
UniProt (by SIFTS) (P9WP99)
Mycobacterium tuberculosisCob(II)alamin adenosyltransferase,Cob(II)yrinic acid a,c-diamide adenosyltransferase,Cobinamide/cobalamin adenosyltransferase, pduO-type ATP:cobalamin adenosyltransferase
2B
(A)
[5-(5,6-dimethyl-1H-benzimidazol-1-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl 1-{3-[3,14,19-tris(2-amino-2-oxoethyl)-8,13,18-tris(3-amino-3-oxopropyl)-1,4,6,9,9,14,16,19-octamethyl-20,21,22,23-tetraazapentacyclo[15.2.1.1~2,5~.1~7,10~.1~12,15~]tricosa-5(23),6,10,12(21),15,17(20)-hexaen-4-yl-kappa~4~N~20~,N~21~,N~22~,N~23~]propanamido}propan-2-yl hydrogenato phosphate]rhodium (non-preferred name)non-polymer1374.31Chemie (SF0)
3C
(A)
5'-DEOXYADENOSINEnon-polymer251.21Chemie (5AD)
4D
(A)
TRIPHOSPHATEnon-polymer258.01Chemie (3PO)
5E, F
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6G
(A)
waterwater18.032Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight20718.4
Non-Polymers*Number of molecules5
Total formula weight1932.1
All*Total formula weight22650.5
*Water molecules are not included.

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PDB entries from 2025-12-17

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