8CQW
Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin B
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, BC (1, AS) | 25S | polymer | 3359 | 1085278.1 | 2 | Candida albicans | ||
| 2 | B, CC (3, AT) | 5S | polymer | 121 | 38943.1 | 2 | Candida albicans | ||
| 3 | C, DC (4, AU) | 5.8S | polymer | 158 | 50683.9 | 2 | Candida albicans | ||
| 4 | D, EC (j, AW) | 60S ribosomal protein L2-B | polymer | 254 | 27366.6 | 2 | UniProt (A0A8H6F1X9) Pfam (PF00181) Pfam (PF03947) | Candida albicans | |
| 5 | E, FC (k, AX) | 60S ribosomal protein L3 | polymer | 389 | 44040.8 | 2 | UniProt (Q59LS1) Pfam (PF00297) | Candida albicans | |
| 6 | F, GC (l, AY) | 60S ribosomal protein L4-B | polymer | 363 | 39282.4 | 2 | UniProt (A0A8H6F4H4) Pfam (PF00573) Pfam (PF14374) | Candida albicans | |
| 7 | G, HC (m, AZ) | Uncharacterized protein CaJ7.0206 | polymer | 298 | 34558.0 | 2 | UniProt (G1UAA6) Pfam (PF17144) Pfam (PF14204) | Candida albicans | |
| 8 | H, IC (n, BA) | 60S ribosomal protein L6 | polymer | 176 | 19798.0 | 2 | UniProt (Q9P834) Pfam (PF01159) | Candida albicans | |
| 9 | I, JC (o, BB) | 60S ribosomal protein L7-A | polymer | 241 | 27447.0 | 2 | UniProt (A0A8H6BVN2) Pfam (PF08079) Pfam (PF00327) | Candida albicans | |
| 10 | J, KC (p, BC) | 60S ribosomal protein L8 | polymer | 262 | 28549.4 | 2 | UniProt (A0A8H6C337) Pfam (PF01248) | Candida albicans | |
| 11 | K, LC (q, BD) | 60S ribosomal protein L9-B | polymer | 191 | 21755.2 | 2 | UniProt (A0A8H6C3N3) Pfam (PF00347) | Candida albicans | |
| 12 | L, MC (r, BE) | 60S ribosomal protein L10 | polymer | 220 | 25236.3 | 2 | UniProt (Q5AIB8) Pfam (PF00252) | Candida albicans | |
| 13 | M, NC (s, BF) | 60S ribosomal protein L11-B | polymer | 174 | 19859.8 | 2 | UniProt (A0A8H6F1S5) Pfam (PF00281) Pfam (PF00673) | Candida albicans | |
| 14 | N, OC (t, BG) | 60S ribosomal protein L13 | polymer | 202 | 23105.8 | 2 | UniProt (A0A8H6F5V7) Pfam (PF01294) | Candida albicans | |
| 15 | O, PC (u, BH) | 60S ribosomal protein L14-B | polymer | 131 | 14748.5 | 2 | UniProt (A0A8H6F332) Pfam (PF01929) | Candida albicans | |
| 16 | P, QC (v, BI) | 60S ribosomal protein L15-A | polymer | 204 | 24389.3 | 2 | UniProt (Q5A6R1) Pfam (PF00827) | Candida albicans | |
| 17 | Q, RC (w, BJ) | Ribosomal protein L13 | polymer | 200 | 22685.8 | 2 | UniProt (A0A8H6BZ56) Pfam (PF00572) | Candida albicans | |
| 18 | R, SC (x, BK) | Ribosomal protein L22 | polymer | 185 | 21002.9 | 2 | UniProt (A0A8H6BUG0) Pfam (PF00237) | Candida albicans | |
| 19 | S, TC (y, BL) | 60S ribosomal protein L18-A | polymer | 186 | 20817.4 | 2 | UniProt (A0A8H6C4Y1) Pfam (PF17135) | Candida albicans | |
| 20 | T, UC (z, BM) | 60S ribosomal protein L19-A | polymer | 190 | 21942.8 | 2 | UniProt (A0A1D8PK40) Pfam (PF01280) | Candida albicans | |
| 21 | U, VC (0, BN) | 60S ribosomal protein L20 | polymer | 172 | 20376.9 | 2 | UniProt (A0A8H6BZJ3) Pfam (PF01775) | Candida albicans | |
| 22 | V, WC (2, BO) | 60S ribosomal protein L21-A | polymer | 160 | 18049.9 | 2 | UniProt (A0A8H6F1C8) Pfam (PF01157) | Candida albicans | |
| 23 | W, XC (5, BP) | 60S ribosomal protein L22-B | polymer | 124 | 14107.9 | 2 | UniProt (A0A1D8PM41) Pfam (PF01776) | Candida albicans | |
| 24 | X, YC (6, BQ) | 60S ribosomal protein L23-A | polymer | 137 | 14495.0 | 2 | UniProt (A0A8H6C444) Pfam (PF00238) | Candida albicans | |
| 25 | Y, ZC (7, BR) | 60S ribosomal protein L24-A | polymer | 155 | 17430.3 | 2 | UniProt (A0A8H6C4U1) Pfam (PF01246) | Candida albicans | |
| 26 | AD, Z (8, BS) | 60S ribosomal protein L25 | polymer | 142 | 15873.6 | 2 | UniProt (A0A8H6F6A1) Pfam (PF03939) Pfam (PF00276) | Candida albicans | |
| 27 | AA, BD (9, BT) | Ribosomal protein L24 | polymer | 127 | 14215.5 | 2 | UniProt (A0A8H6F3X2) Pfam (PF16906) | Candida albicans | |
| 28 | BA, CD (AA, BU) | 60S ribosomal protein L27 | polymer | 136 | 15551.4 | 2 | UniProt (Q9P843) Pfam (PF01777) | Candida albicans | |
| 29 | CA, DD (AB, BV) | 60S ribosomal protein L28 | polymer | 149 | 16703.4 | 2 | UniProt (A0A8H6BVY8) Pfam (PF00828) | Candida albicans | |
| 30 | DA, ED (AC, BW) | 60S ribosomal protein L29 | polymer | 63 | 7135.3 | 2 | UniProt (A0A8H6F0G8) Pfam (PF01779) | Candida albicans | |
| 31 | EA, FD (AD, BX) | 60S ribosomal protein L30 | polymer | 106 | 11520.4 | 2 | UniProt (A0A1D8PM75) Pfam (PF01248) | Candida albicans | |
| 32 | FA, GD (AE, BY) | 60S ribosomal protein L31-B | polymer | 112 | 12993.1 | 2 | UniProt (A0A8H6F1M1) Pfam (PF01198) | Candida albicans | |
| 33 | GA, HD (AF, BZ) | 60S ribosomal protein L32 | polymer | 131 | 14993.7 | 2 | UniProt (O94008) Pfam (PF01655) | Candida albicans | |
| 34 | HA, ID (AG, CA) | 60S ribosomal protein L33-A | polymer | 107 | 12138.2 | 2 | UniProt (A0A8H6BW57) Pfam (PF01247) | Candida albicans | |
| 35 | IA, JD (AH, CB) | 60S ribosomal protein L34-B | polymer | 122 | 13774.3 | 2 | UniProt (A0A8H6F171) Pfam (PF01199) | Candida albicans | |
| 36 | JA, KD (AI, CC) | Ribosomal protein L29 | polymer | 120 | 14118.8 | 2 | UniProt (A0A8H6F6B7) Pfam (PF00831) | Candida albicans | |
| 37 | KA, LD (AJ, CD) | 60S ribosomal protein L36 | polymer | 99 | 11096.2 | 2 | UniProt (P47834) Pfam (PF01158) | Candida albicans | L39 |
| 38 | LA, MD (AK, CE) | 60S ribosomal protein L37-B | polymer | 90 | 10102.8 | 2 | UniProt (A0A1D8PF45) Pfam (PF01907) | Candida albicans | |
| 39 | MA, ND (AL, CF) | 60S ribosomal protein L38 | polymer | 78 | 8911.5 | 2 | UniProt (A0A1D8PG16) Pfam (PF01781) | Candida albicans | |
| 40 | NA, OD (AM, CG) | 60S ribosomal protein L39 | polymer | 51 | 6347.5 | 2 | UniProt (Q96W55) Pfam (PF00832) | Candida albicans | L46 |
| 41 | OA, PD (AN, CH) | 60S ribosomal protein L40-B | polymer | 52 | 6078.4 | 2 | UniProt (A0A1D8PL68) Pfam (PF01020) | Candida albicans | |
| 42 | PA, QD (AO, CI) | 60S ribosomal protein L41 | polymer | 25 | 3396.3 | 2 | UniProt (P9WER7) Pfam (PF05162) | Candida albicans | |
| 43 | QA, RD (AP, CJ) | 60S ribosomal protein L42-B | polymer | 106 | 12259.6 | 2 | UniProt (A0A8H6BR69) Pfam (PF00935) | Candida albicans | |
| 44 | RA, SD (AQ, CK) | 60S ribosomal protein L43-A | polymer | 92 | 10136.8 | 2 | UniProt (A0A1D8PP14) Pfam (PF01780) | Candida albicans | |
| 45 | SA, TD (i, CL) | 60S ribosomal protein CAALFM_C304810CA | polymer | 267 | 29126.1 | 2 | UniProt (A0A1D8PK71) Pfam (PF09598) | Candida albicans | |
| 46 | TA, UD (B, CM) | 18S | polymer | 1787 | 575838.6 | 2 | Candida albicans | ||
| 47 | UA, VD (C, CN) | 40S ribosomal protein S0 | polymer | 261 | 28759.3 | 2 | UniProt (A0A8H6C395) Pfam (PF00318) | Candida albicans | |
| 48 | VA, WD (D, CO) | 40S ribosomal protein S1 | polymer | 256 | 29041.9 | 2 | UniProt (A0A8H6C387) Pfam (PF01015) | Candida albicans | |
| 49 | WA, XD (E, CP) | Ribosomal protein S5 | polymer | 249 | 26917.3 | 2 | UniProt (A0A8H6BZ90) Pfam (PF00333) Pfam (PF03719) | Candida albicans | |
| 50 | XA, YD (F, CQ) | Ribosomal protein S3 | polymer | 251 | 27313.6 | 2 | UniProt (A0A8H6BYS1) Pfam (PF07650) Pfam (PF00189) | Candida albicans | |
| 51 | YA, ZD (G, CR) | 40S ribosomal protein S4 | polymer | 262 | 29435.4 | 2 | UniProt (A0A1D8PCI6) Pfam (PF08071) Pfam (PF01479) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) | Candida albicans | |
| 52 | AE, ZA (H, CS) | Ribosomal protein S7 | polymer | 225 | 25319.9 | 2 | UniProt (A0A8H6BS29) Pfam (PF00177) | Candida albicans | |
| 53 | AB, BE (I, CT) | 40S ribosomal protein S6 | polymer | 236 | 27146.5 | 2 | UniProt (A0A8H6BZ37) Pfam (PF01092) | Candida albicans | |
| 54 | BB, CE (J, CU) | 40S ribosomal protein S7 | polymer | 186 | 21285.8 | 2 | UniProt (A0A8H6C655) Pfam (PF01251) | Candida albicans | |
| 55 | CB, DE (K, CV) | 40S ribosomal protein S8 | polymer | 206 | 22802.0 | 2 | UniProt (A0A8H6F0S0) Pfam (PF01201) | Candida albicans | |
| 56 | DB, EE (L, CW) | Ribosomal protein S4 | polymer | 189 | 21765.1 | 2 | UniProt (A0A8H6F1X2) Pfam (PF00163) Pfam (PF01479) | Candida albicans | |
| 57 | EB, FE (M, CX) | 40S ribosomal protein S10-A | polymer | 118 | 13836.8 | 2 | UniProt (A0A8H6BWQ8) Pfam (PF03501) | Candida albicans | |
| 58 | FB, GE (N, CY) | 40S ribosomal protein S11A | polymer | 155 | 17638.6 | 2 | UniProt (A0A1D8PN83) Pfam (PF16205) Pfam (PF00366) | Candida albicans | |
| 59 | GB, HE (O, CZ) | 40S ribosomal protein S12 | polymer | 143 | 15715.9 | 2 | UniProt (A0A8H6C3A1) Pfam (PF01248) | Candida albicans | |
| 60 | HB, IE (P, DA) | 40S ribosomal protein S13 | polymer | 151 | 16976.8 | 2 | UniProt (A0A8H6F4G0) Pfam (PF08069) Pfam (PF00312) | Candida albicans | |
| 61 | IB, JE (Q, DB) | 40S ribosomal protein S14-A | polymer | 132 | 14052.1 | 2 | UniProt (A0A8H6F0V4) Pfam (PF00411) | Candida albicans | |
| 62 | JB, KE (R, DC) | 40S ribosomal protein S15 | polymer | 142 | 15967.8 | 2 | UniProt (A0A1D8PK22) Pfam (PF00203) | Candida albicans | |
| 63 | KB, LE (S, DD) | 40S ribosomal protein S16 | polymer | 142 | 15769.5 | 2 | UniProt (O94017) Pfam (PF00380) | Candida albicans | |
| 64 | LB, ME (T, DE) | 40S ribosomal protein S17-B | polymer | 137 | 15770.3 | 2 | UniProt (A0A8H6BTR7) Pfam (PF00833) | Candida albicans | |
| 65 | MB, NE (U, DF) | 40S ribosomal protein S18-B | polymer | 145 | 17023.8 | 2 | UniProt (A0A8H6F3Y8) Pfam (PF00416) | Candida albicans | |
| 66 | NB, OE (V, DG) | 40S ribosomal protein S19-A | polymer | 145 | 16097.2 | 2 | UniProt (A0A8H6C5L4) Pfam (PF01090) | Candida albicans | |
| 67 | OB, PE (W, DH) | Ribosomal protein S10 | polymer | 119 | 13366.5 | 2 | UniProt (A0A8H6BYJ9) Pfam (PF00338) | Candida albicans | |
| 68 | PB, QE (X, DI) | 40S ribosomal protein S21 | polymer | 87 | 9652.8 | 2 | UniProt (Q9P844) Pfam (PF01249) | Candida albicans | |
| 69 | QB, RE (Y, DJ) | 40S ribosomal protein S22-A | polymer | 130 | 14807.2 | 2 | UniProt (A0A8H6F0N4) Pfam (PF00410) | Candida albicans | |
| 70 | RB, SE (Z, DK) | Ribosomal protein S23 (S12) | polymer | 145 | 16000.8 | 2 | UniProt (A0A8H6F0V0) Pfam (PF00164) | Candida albicans | |
| 71 | SB, TE (a, DL) | 40S ribosomal protein S24 | polymer | 135 | 15546.9 | 2 | UniProt (A0A8H6C3K1) Pfam (PF01282) | Candida albicans | |
| 72 | TB, UE (b, DM) | 40S ribosomal protein S25 | polymer | 105 | 11633.8 | 2 | UniProt (A0A8H6EZQ8) Pfam (PF03297) | Candida albicans | |
| 73 | UB, VE (c, DN) | 40S ribosomal protein S26 | polymer | 119 | 13606.1 | 2 | UniProt (A0A8H6BTS1) Pfam (PF01283) | Candida albicans | |
| 74 | VB, WE (d, DO) | 40S ribosomal protein S27 | polymer | 82 | 8982.5 | 2 | UniProt (A0A8H6BWE6) Pfam (PF01667) | Candida albicans | |
| 75 | WB, XE (e, DP) | 40S ribosomal protein S28-B | polymer | 67 | 7536.8 | 2 | UniProt (A0A8H6C0A5) Pfam (PF01200) | Candida albicans | |
| 76 | XB, YE (f, DQ) | 40S ribosomal protein S29A | polymer | 56 | 6615.6 | 2 | UniProt (A0A1D8PTR4) Pfam (PF00253) | Candida albicans | |
| 77 | YB, ZE (g, DR) | 40S ribosomal protein S30 | polymer | 63 | 7127.4 | 2 | UniProt (A0A1D8PSK2) Pfam (PF04758) | Candida albicans | |
| 78 | AF, ZB (h, DS) | Ubiquitin-40S ribosomal protein S31 fusion protein | polymer | 193 | 22615.5 | 2 | UniProt (Q5A109) Pfam (PF00240) Pfam (PF01599) | Candida albicans | |
| 79 | AC, BF (AR, DT) | Guanine nucleotide-binding protein subunit beta-like protein | polymer | 317 | 34593.9 | 2 | UniProt (A0A8H6C3E7) Pfam (PF00400) | Candida albicans | |
| 80 | CF, GF (P0, p0) | 60S acidic ribosomal protein P0 | polymer | 312 | 33302.6 | 2 | UniProt (G1UA71) Pfam (PF00466) Pfam (PF17777) Pfam (PF00428) | Candida albicans | |
| 81 | DF (12) | 60S ribosomal protein L12-A | polymer | 165 | 17791.5 | 1 | UniProt (A0A8H6C5X8) Pfam (PF03946) Pfam (PF00298) | Candida albicans | |
| 82 | EF, FF (L1, l1) | Ribosomal protein | polymer | 217 | 24416.7 | 2 | UniProt (A0A8H6F4E7) Pfam (PF00687) | Candida albicans | |
| 83 | AAA, AAB, ABA, ACA, ADA... (3, CM, o, 6, AP...) | MAGNESIUM ION | non-polymer | 24.3 | 1210 | Chemie (MG) | |||
| 84 | IF, WJA (1, AS) | 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose | non-polymer | 804.8 | 2 | Chemie (3K5) | |||
| 85 | BDA, MAB, OAB, PAB, QCA... (AQ, DN, DQ, DS, AH...) | ZINC ION | non-polymer | 65.4 | 17 | Chemie (ZN) | |||
| 86 | BAB, YIA (CM, B) | HYGROMYCIN B | non-polymer | 527.5 | 2 | Chemie (HYG) | |||
| 87 | QAB, RAB, SAB, TAB (1, 4, B, AS) | water | water | 18.0 | 30 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 163 |
| Total formula weight | 6371198.5 | |
| Non-Polymers* | Number of molecules | 1231 |
| Total formula weight | 33185.7 | |
| All* | Total formula weight | 6404384.2 |
