8CQW
Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin B
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 173 |
Detector technology | PIXEL |
Collection date | 2022-03-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 298.810, 292.840, 450.180 |
Unit cell angles | 90.00, 100.11, 90.00 |
Refinement procedure
Resolution | 163.720 - 3.050 |
R-factor | 0.2828 |
Rwork | 0.283 |
R-free | 0.30680 |
Structure solution method | SAD |
RMSD bond length | 0.003 |
RMSD bond angle | 0.781 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC |
Refinement software | PHENIX ((1.19rc4_4035: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 163.720 | 163.720 | 3.100 |
High resolution limit [Å] | 3.050 | 50.000 | 3.050 |
Rmerge | 0.838 | 0.052 | 2.659 |
Rmeas | 0.868 | 0.054 | 2.754 |
Rpim | 0.226 | ||
Number of reflections | 1429361 | 282 | 67955 |
<I/σ(I)> | 3.69 | ||
Completeness [%] | 99.1 | ||
Redundancy | 14.5 | ||
CC(1/2) | 0.986 | 0.999 | 0.044 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277.15 | PEG 20K, KSCN, Mg Acetate, K - acetate, Bis-Tris-Acetate, Glycerol, Spermidine, phyllanthoside |