8CGR
Apramycin bound to the 30S body
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 16S rRNA | polymer | 1540 | 499197.9 | 1 | Escherichia coli BW25113 | ||
| 2 | B (D) | Small ribosomal subunit protein uS4 | polymer | 206 | 23514.2 | 1 | UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479) | Escherichia coli BW25113 | 30S ribosomal protein S4 |
| 3 | C (E) | Small ribosomal subunit protein uS5 | polymer | 167 | 17629.4 | 1 | UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) | Escherichia coli BW25113 | 30S ribosomal protein S5 |
| 4 | D (F) | Small ribosomal subunit protein bS6, non-modified isoform | polymer | 131 | 15211.1 | 1 | UniProt (P02358) Pfam (PF01250) | Escherichia coli BW25113 | |
| 5 | E (H) | Small ribosomal subunit protein uS8 | polymer | 130 | 14146.6 | 1 | UniProt (P0A7W7) Pfam (PF00410) | Escherichia coli BW25113 | 30S ribosomal protein S8 |
| 6 | F (K) | Small ribosomal subunit protein uS11 | polymer | 129 | 13872.0 | 1 | UniProt (P0A7R9) Pfam (PF00411) | Escherichia coli BW25113 | 30S ribosomal protein S11 |
| 7 | G (L) | Small ribosomal subunit protein uS12 | polymer | 124 | 13814.2 | 1 | UniProt (P0A7S3) Pfam (PF00164) | Escherichia coli BW25113 | 30S ribosomal protein S12 |
| 8 | H (O) | Small ribosomal subunit protein uS15 | polymer | 89 | 10290.8 | 1 | UniProt (P0ADZ4) Pfam (PF00312) | Escherichia coli BW25113 | 30S ribosomal protein S15 |
| 9 | I (P) | 30S ribosomal protein S16 | polymer | 82 | 9207.6 | 1 | UniProt (P0A7T3) Pfam (PF00886) | Escherichia coli BW25113 | Small ribosomal subunit protein bS16 |
| 10 | J (Q) | Small ribosomal subunit protein uS17 | polymer | 84 | 9724.5 | 1 | UniProt (P0AG63) Pfam (PF00366) | Escherichia coli BW25113 | 30S ribosomal protein S17 |
| 11 | K (R) | Small ribosomal subunit protein bS18 | polymer | 75 | 9005.5 | 1 | UniProt (P0A7T7) Pfam (PF01084) | Escherichia coli BW25113 | 30S ribosomal protein S18 |
| 12 | L (T) | 30S ribosomal protein S20 | polymer | 87 | 9708.5 | 1 | UniProt (P0A7U7) Pfam (PF01649) | Escherichia coli BW25113 | Small ribosomal subunit protein bS20 |
| 13 | M (U) | Small ribosomal subunit protein bS21 | polymer | 71 | 8524.0 | 1 | UniProt (P68679) Pfam (PF01165) | Escherichia coli BW25113 | 30S ribosomal protein S21 |
| 14 | N (a) | 23S rRNA | polymer | 2904 | 941811.6 | 1 | Escherichia coli BW25113 | ||
| 15 | AC, BC, CC, DC, EC... (A, F) | POTASSIUM ION | non-polymer | 39.1 | 28 | Chemie (K) PubChem (813) | |||
| 16 | Q, R, S (A) | APRAMYCIN | non-polymer | 539.6 | 3 | Chemie (AM2) PubChem (16757849) PubChem (71428) PubChem (23305085) PubChem (16395964) PubChem (439519) PubChem (44119923) PubChem (23958199) PubChem (44784762) PubChem (45105104) PubChem (52949248) PubChem (57397142) PubChem (53393693) PubChem (71306481) PubChem (71313473) PubChem (73951969) PubChem (6710735) PubChem (92328353) PubChem (92328355) PubChem (89903933) PubChem (3081545) PubChem (96358443) PubChem (96358448) PubChem (92328352) PubChem (92328354) PubChem (96358449) PubChem (96358446) PubChem (102565449) PubChem (6427043) PubChem (6604396) PubChem (122581310) PubChem (6713994) PubChem (124511479) PubChem (124717614) PubChem (124717616) PubChem (10098771) PubChem (118410308) PubChem (118410321) PubChem (134693919) PubChem (134814278) PubChem (124507110) PubChem (124511478) PubChem (124511480) PubChem (124717613) PubChem (124717615) PubChem (12898620) PubChem (137628585) PubChem (138107157) PubChem (126541504) PubChem (126541519) PubChem (126969597) PubChem (129715889) PubChem (131632422) PubChem (134780435) PubChem (134780436) PubChem (155802492) PubChem (162960550) PubChem (162960552) PubChem (164114074) PubChem (137706136) PubChem (140891139) PubChem (145998733) PubChem (171317955) PubChem (162960551) PubChem (172433808) | |||
| 17 | AA, AB, BA, BB, CA... (A) | MAGNESIUM ION | non-polymer | 24.3 | 57 | Chemie (MG) PubChem (888) | |||
| 18 | AD, BD, CD, DD, ED... (E, F, H, K, L...) | water | water | 18.0 | 1928 | Chemie (HOH) |
Sequence modifications
K: 1 - 129 (UniProt: P0A7R9)
| PDB | External Database | Details |
|---|---|---|
| Ias 119 | Asn 119 | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 14 |
| Total formula weight | 1595657.8 | |
| Non-Polymers* | Number of molecules | 88 |
| Total formula weight | 4098.9 | |
| All* | Total formula weight | 1599756.6 |
