Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (0) | 40S ribosomal protein S24-A | polymer | 135 | 15362.8 | 1 | UniProt (P0CX31) Pfam (PF01282) | Saccharomyces cerevisiae (baker's yeast) | RP50,Small ribosomal subunit protein eS24-A |
| 2 | B (1) | 40S ribosomal protein S25-A | polymer | 108 | 12067.3 | 1 | UniProt (Q3E792) Pfam (PF03297) | Saccharomyces cerevisiae (baker's yeast) | RP45,S31,Small ribosomal subunit protein eS25-A,YS23 |
| 3 | C (2) | 40S ribosomal protein S26 | polymer | 119 | 13538.9 | 1 | UniProt (A0A6A5PUG0) | Saccharomyces cerevisiae (baker's yeast) | |
| 4 | D (3) | 40S ribosomal protein S27-A | polymer | 82 | 8893.4 | 1 | UniProt (P35997) Pfam (PF01667) | Saccharomyces cerevisiae (baker's yeast) | RP61,Small ribosomal subunit protein eS27-A,YS20 |
| 5 | E (4) | 40S ribosomal protein S28-A | polymer | 67 | 7605.8 | 1 | UniProt (Q3E7X9) Pfam (PF01200) | Saccharomyces cerevisiae (baker's yeast) | S33,Small ribosomal subunit protein eS28-A,YS27 |
| 6 | F (5) | HLJ1_G0030400.mRNA.1.CDS.1 | polymer | 56 | 6675.7 | 1 | UniProt (A0A6A5PV92) | Saccharomyces cerevisiae (baker's yeast) | HLJ1_G0038740.mRNA.1.CDS.1,HN1_G0030180.mRNA.1.CDS.1,JXXY16_1_G0039900.mRNA.1.CDS.1,SX2_G0030120.mRNA.1.CDS.1,XXYS1_4_G0042270.mRNA.1.CDS.1,Y55_G0030330.mRNA.1.CDS.1 |
| 7 | G (6) | 40S ribosomal protein S30-A | polymer | 63 | 7137.5 | 1 | UniProt (P0CX33) Pfam (PF04758) | Saccharomyces cerevisiae (baker's yeast) | Small ribosomal subunit protein eS30-A |
| 8 | H (7) | Guanine nucleotide-binding protein subunit beta-like protein | polymer | 319 | 34841.2 | 1 | UniProt (P38011) Pfam (PF00400) | Saccharomyces cerevisiae (baker's yeast) | Receptor for activated C kinase,Receptor of activated protein kinase C 1,RACK1,Small ribosomal subunit protein RACK1 |
| 9 | I (8) | Ubiquitin-40S ribosomal protein S31 | polymer | 152 | 17254.2 | 1 | UniProt (A0A6A5PU37) | Saccharomyces cerevisiae (baker's yeast) | |
| 10 | J (A) | 60S ribosomal protein L16-A | polymer | 199 | 22247.2 | 1 | UniProt (P26784) Pfam (PF00572) | Saccharomyces cerevisiae (baker's yeast) | L13a,L21,Large ribosomal subunit protein uL13-A,RP22,YL15 |
| 11 | K (AA) | 25S ribosomal RNA | polymer | 3396 | 1098082.8 | 1 | GenBank (1262303) | Saccharomyces cerevisiae (baker's yeast) | |
| 12 | L (B) | 60S ribosomal protein L17-A | polymer | 338 | 37891.0 | 1 | Saccharomyces cerevisiae | ||
| 13 | M (BB) | 5S ribosomal RNA | polymer | 121 | 38951.1 | 1 | GenBank (1329886537) | Saccharomyces cerevisiae (baker's yeast) | |
| 14 | N, Q (Bb, Cc) | Transfer RNA fMet | polymer | 77 | 24801.8 | 2 | GenBank (170517292) | Escherichia coli | |
| 15 | O (C) | 60S ribosomal protein L18-A | polymer | 186 | 20609.3 | 1 | UniProt (P0CX49) Pfam (PF17135) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein eL18-A,RP28 |
| 16 | P (CC) | 5.8S ribosomal RNA | polymer | 158 | 50682.9 | 1 | GenBank (1331532632) | Saccharomyces cerevisiae (baker's yeast) | |
| 17 | R (D) | 60S ribosomal protein L19-A | polymer | 189 | 21762.3 | 1 | UniProt (P0CX82) Pfam (PF01280) | Saccharomyces cerevisiae (baker's yeast) | L23,Large ribosomal subunit protein eL19-A,RP15L,RP33,YL14 |
| 18 | S (DD) | 60S acidic ribosomal protein P0 | polymer | 312 | 33749.1 | 1 | UniProt (P05317) Pfam (PF00466) Pfam (PF17777) Pfam (PF00428) | Saccharomyces cerevisiae (baker's yeast) | A0,L10e,Large ribosomal subunit protein uL10 |
| 19 | T (Dd) | Messenger RNA | polymer | 39 | 12744.8 | 1 | Saccharomyces cerevisiae | ||
| 20 | U (E) | 60S ribosomal protein L20-A | polymer | 172 | 20478.9 | 1 | UniProt (P0CX23) Pfam (PF01775) | Saccharomyces cerevisiae (baker's yeast) | L18a,Large ribosomal subunit protein eL20-A |
| 21 | V (EE) | 60S ribosomal protein L2-A | polymer | 254 | 27463.6 | 1 | UniProt (P0CX45) Pfam (PF00181) Pfam (PF03947) | Saccharomyces cerevisiae (baker's yeast) | L5,Large ribosomal subunit protein uL2-A,RP8,YL6 |
| 22 | W (Ee) | 60S ribosomal protein L12-A | polymer | 165 | 17850.6 | 1 | UniProt (P0CX53) Pfam (PF03946) Pfam (PF00298) | Saccharomyces cerevisiae (baker's yeast) | L15,Large ribosomal subunit protein uL11-A,YL23 |
| 23 | X (F) | 60S ribosomal protein L21-A | polymer | 160 | 18279.3 | 1 | UniProt (Q02753) Pfam (PF01157) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein eL21-A |
| 24 | Y (FF) | 60S ribosomal protein L3 | polymer | 387 | 43850.8 | 1 | UniProt (P14126) Pfam (PF00297) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein uL3,Maintenance of killer protein 8,RP1,Trichodermin resistance protein,YL1 |
| 25 | Z (G) | 60S ribosomal protein L22-A | polymer | 121 | 13711.4 | 1 | UniProt (P05749) Pfam (PF01776) | Saccharomyces cerevisiae (baker's yeast) | L1c,Large ribosomal subunit protein eL22-A,RP4,YL31 |
| 26 | AA (GG) | 60S ribosomal protein L4-A | polymer | 362 | 39159.1 | 1 | UniProt (P10664) Pfam (PF00573) Pfam (PF14374) | Saccharomyces cerevisiae (baker's yeast) | L2,Large ribosomal subunit protein uL4-A,RP2,YL2 |
| 27 | BA (H) | 60S ribosomal protein L23-A | polymer | 137 | 14494.0 | 1 | UniProt (P0CX41) Pfam (PF00238) | Saccharomyces cerevisiae (baker's yeast) | L17a,Large ribosomal subunit protein uL14-A,YL32 |
| 28 | CA (HH) | 60S ribosomal protein L5 | polymer | 297 | 33764.8 | 1 | UniProt (P26321) Pfam (PF17144) Pfam (PF14204) | Saccharomyces cerevisiae (baker's yeast) | L1,L1a,Large ribosomal subunit protein uL18,Ribosomal 5S RNA-binding protein,YL3 |
| 29 | DA (I) | 60S ribosomal protein L24-A | polymer | 155 | 17661.7 | 1 | UniProt (P04449) Pfam (PF01246) | Saccharomyces cerevisiae (baker's yeast) | L30,Large ribosomal subunit protein eL24-A,RP29,YL21 |
| 30 | EA (II) | 60S ribosomal protein L6-A | polymer | 176 | 20000.6 | 1 | UniProt (Q02326) Pfam (PF01159) | Saccharomyces cerevisiae (baker's yeast) | L17,Large ribosomal subunit protein eL6-A,RP18,YL16 |
| 31 | FA (J) | 60S ribosomal protein L25 | polymer | 142 | 15787.6 | 1 | UniProt (P04456) Pfam (PF03939) Pfam (PF00276) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein uL23,RP16L,YL25,YP42' |
| 32 | GA (JJ) | 60S ribosomal protein L7-A | polymer | 244 | 27686.3 | 1 | UniProt (P05737) Pfam (PF08079) Pfam (PF00327) | Saccharomyces cerevisiae (baker's yeast) | L6,Large ribosomal subunit protein uL30-A,RP11,YL8 |
| 33 | HA (K) | 60S ribosomal protein L26-A | polymer | 127 | 14265.8 | 1 | UniProt (P05743) Pfam (PF16906) Pfam (PF00467) | Saccharomyces cerevisiae (baker's yeast) | L33,Large ribosomal subunit protein uL24-A,YL33 |
| 34 | IA (KK) | 60S ribosomal protein L8-A | polymer | 256 | 28175.8 | 1 | UniProt (P17076) Pfam (PF01248) | Saccharomyces cerevisiae (baker's yeast) | L4,L4-2,L7a-1,Large ribosomal subunit protein eL8-A,Maintenance of killer protein 7,RP6,YL5 |
| 35 | JA (L) | 60S ribosomal protein L27-A | polymer | 136 | 15568.4 | 1 | UniProt (P0C2H6) Pfam (PF01777) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein eL27-A |
| 36 | KA (LL) | RPL9A isoform 1 | polymer | 191 | 21605.1 | 1 | UniProt (A0A8H4FCT7) | Saccharomyces cerevisiae (baker's yeast) | |
| 37 | LA (M) | 60S ribosomal protein L28 | polymer | 149 | 16761.7 | 1 | UniProt (P02406) Pfam (PF00828) | Saccharomyces cerevisiae (baker's yeast) | L27a,L29,Large ribosomal subunit protein uL15,RP44,RP62,YL24 |
| 38 | MA (MM) | 60S ribosomal protein L10 | polymer | 221 | 25410.5 | 1 | UniProt (P41805) Pfam (PF00252) | Saccharomyces cerevisiae (baker's yeast) | L9,Large ribosomal subunit protein uL16,Ubiquinol-cytochrome C reductase complex subunit VI-requiring protein |
| 39 | NA (N) | 60S ribosomal protein L29 | polymer | 59 | 6691.9 | 1 | UniProt (P05747) Pfam (PF01779) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein eL29,YL43 |
| 40 | OA (NN) | 60S ribosomal protein L11-A | polymer | 174 | 19755.7 | 1 | UniProt (P0C0W9) Pfam (PF00281) Pfam (PF00673) | Saccharomyces cerevisiae (baker's yeast) | L16,Large ribosomal subunit protein uL5-A,RP39,YL22 |
| 41 | PA (O) | 60S ribosomal protein L30 | polymer | 105 | 11430.4 | 1 | UniProt (P14120) Pfam (PF01248) | Saccharomyces cerevisiae (baker's yeast) | L32,Large ribosomal subunit protein eL30,RP73,YL38 |
| 42 | QA (OO) | 60S ribosomal protein L13-A | polymer | 199 | 22604.2 | 1 | UniProt (Q12690) Pfam (PF01294) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein eL13-A |
| 43 | RA (P) | 60S ribosomal protein L31-A | polymer | 113 | 12980.2 | 1 | UniProt (P0C2H8) Pfam (PF01198) | Saccharomyces cerevisiae (baker's yeast) | L34,Large ribosomal subunit protein eL31-A,YL28 |
| 44 | SA (PP) | 60S ribosomal protein L14-A | polymer | 138 | 15195.1 | 1 | UniProt (P36105) Pfam (PF00467) Pfam (PF01929) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein eL14-A |
| 45 | TA (Q) | 60S ribosomal protein L32 | polymer | 130 | 14809.4 | 1 | UniProt (P38061) Pfam (PF01655) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein eL32 |
| 46 | UA (QQ) | 60S ribosomal protein L15-A | polymer | 204 | 24482.4 | 1 | UniProt (P05748) Pfam (PF00827) | Saccharomyces cerevisiae (baker's yeast) | L13,Large ribosomal subunit protein eL15-A,RP15R,YL10,YP18 |
| 47 | VA (R) | 60S ribosomal protein L33-A | polymer | 107 | 12177.1 | 1 | UniProt (P05744) Pfam (PF01247) | Saccharomyces cerevisiae (baker's yeast) | L37,Large ribosomal subunit protein eL33-A,RP47,YL37 |
| 48 | WA (S) | 60S ribosomal protein L34-A | polymer | 121 | 13673.2 | 1 | UniProt (P87262) Pfam (PF01199) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein eL34-A |
| 49 | XA (T) | 60S ribosomal protein L35-A | polymer | 120 | 13942.6 | 1 | UniProt (P0CX84) Pfam (PF00831) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein uL29-A |
| 50 | YA (U) | 60S ribosomal protein L36-A | polymer | 100 | 11151.3 | 1 | UniProt (P05745) Pfam (PF01158) | Saccharomyces cerevisiae (baker's yeast) | L39,Large ribosomal subunit protein eL36-A,YL39 |
| 51 | ZA (V) | 60S ribosomal protein L37-A | polymer | 88 | 9877.4 | 1 | UniProt (P49166) Pfam (PF01907) | Saccharomyces cerevisiae (baker's yeast) | L43,Large ribosomal subunit protein eL37-A,YL35,YP55 |
| 52 | AB (W) | 60S ribosomal protein L38 | polymer | 78 | 8845.6 | 1 | UniProt (P49167) Pfam (PF01781) | Saccharomyces cerevisiae (baker's yeast) | Large ribosomal subunit protein eL38 |
| 53 | BB (X) | 60S ribosomal protein L39 | polymer | 51 | 6358.6 | 1 | UniProt (P04650) Pfam (PF00832) | Saccharomyces cerevisiae (baker's yeast) | L46,Large ribosomal subunit protein eL39,YL40 |
| 54 | CB (Y) | Ubiquitin-60S ribosomal protein L40 | polymer | 128 | 14583.1 | 1 | UniProt (P0CH08) Pfam (PF00240) Pfam (PF01020) | Saccharomyces cerevisiae (baker's yeast) | |
| 55 | DB (Z) | 60S ribosomal protein L41 | polymer | 25 | 3354.2 | 1 | UniProt (A0A8H8UMB4) | Saccharomyces cerevisiae (baker's yeast) | |
| 56 | EB (a) | 60S ribosomal protein L42-A | polymer | 106 | 12246.7 | 1 | UniProt (P0CX27) Pfam (PF00935) | Saccharomyces cerevisiae (baker's yeast) | L41,Large ribosomal subunit protein eL42-A,YL27,YP44 |
| 57 | FB (b) | 60S ribosomal protein L43-A | polymer | 92 | 10113.0 | 1 | UniProt (P0CX25) Pfam (PF01780) | Saccharomyces cerevisiae (baker's yeast) | L37a,Large ribosomal subunit protein eL43-A,YL35 |
| 58 | GB (c) | 18S ribosomal RNA | polymer | 1800 | 580284.7 | 1 | Saccharomyces cerevisiae | ||
| 59 | HB (d) | 40S ribosomal protein S0-A | polymer | 252 | 28051.3 | 1 | UniProt (P32905) Pfam (PF00318) | Saccharomyces cerevisiae (baker's yeast) | Nucleic acid-binding protein NAB1A,Small ribosomal subunit protein uS2-A |
| 60 | IB (e) | 40S ribosomal protein S1-A | polymer | 255 | 28798.5 | 1 | UniProt (P33442) Pfam (PF01015) | Saccharomyces cerevisiae (baker's yeast) | RP10A,Small ribosomal subunit protein eS1-A |
| 61 | JB (f) | 40S ribosomal protein S2 | polymer | 254 | 27490.8 | 1 | UniProt (P25443) Pfam (PF00333) Pfam (PF03719) | Saccharomyces cerevisiae (baker's yeast) | Omnipotent suppressor protein SUP44,RP12,S4,Small ribosomal subunit protein uS5,YS5 |
| 62 | KB (g) | RPS3 isoform 1 | polymer | 240 | 26542.8 | 1 | UniProt (A0A6A5Q3Q1) | Saccharomyces cerevisiae (baker's yeast) | |
| 63 | LB (h) | 40S ribosomal protein S4-A | polymer | 261 | 29469.3 | 1 | UniProt (P0CX35) Pfam (PF08071) Pfam (PF01479) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) | Saccharomyces cerevisiae (baker's yeast) | RP5,S7,Small ribosomal subunit protein eS4-A,YS6 |
| 64 | MB (i) | 40S ribosomal protein S5 | polymer | 225 | 25072.6 | 1 | UniProt (P26783) Pfam (PF00177) | Saccharomyces cerevisiae (baker's yeast) | RP14,S2,Small ribosomal subunit protein uS7,YS8 |
| 65 | NB (j) | 40S ribosomal protein S6-A | polymer | 236 | 27054.5 | 1 | UniProt (P0CX37) Pfam (PF01092) | Saccharomyces cerevisiae (baker's yeast) | RP9,S10,Small ribosomal subunit protein eS6-A,YS4 |
| 66 | OB (k) | 40S ribosomal protein S7-A | polymer | 190 | 21658.2 | 1 | UniProt (P26786) Pfam (PF01251) | Saccharomyces cerevisiae (baker's yeast) | RP30,RP40,Small ribosomal subunit protein eS7-A |
| 67 | PB (l) | 40S ribosomal protein S8-B | polymer | 200 | 22537.8 | 1 | UniProt (P0CX40) Pfam (PF01201) | Saccharomyces cerevisiae (baker's yeast) | RP19,S14,Small ribosomal subunit protein eS8-B,YS9 |
| 68 | QB (m) | 40S ribosomal protein S9-A | polymer | 197 | 22487.9 | 1 | UniProt (O13516) Pfam (PF00163) Pfam (PF01479) | Saccharomyces cerevisiae (baker's yeast) | RP21,S13,Small ribosomal subunit protein uS4-A,YP28,YS11 |
| 69 | RB (n) | 40S ribosomal protein S10-A | polymer | 105 | 12757.4 | 1 | UniProt (Q08745) Pfam (PF03501) | Saccharomyces cerevisiae (baker's yeast) | Small ribosomal subunit protein eS10-A |
| 70 | SB (o) | 40S ribosomal protein S11-A | polymer | 156 | 17785.9 | 1 | UniProt (P0CX47) Pfam (PF16205) Pfam (PF00366) | Saccharomyces cerevisiae (baker's yeast) | RP41,S18,Small ribosomal subunit protein uS17-A,YS12 |
| 71 | TB (p) | 40S ribosomal protein S13 | polymer | 151 | 17059.9 | 1 | UniProt (P05756) Pfam (PF08069) Pfam (PF00312) | Saccharomyces cerevisiae (baker's yeast) | S27a,Small ribosomal subunit protein uS15,YS15 |
| 72 | UB (q) | 40S ribosomal protein S14-A | polymer | 137 | 14562.7 | 1 | UniProt (P06367) Pfam (PF00411) | Saccharomyces cerevisiae (baker's yeast) | RP59A,Small ribosomal subunit protein uS11-A |
| 73 | VB (r) | 40S ribosomal protein S15 | polymer | 142 | 16031.9 | 1 | UniProt (Q01855) Pfam (PF00203) | Saccharomyces cerevisiae (baker's yeast) | RIG protein,RP52,S21,Small ribosomal subunit protein uS19,YS21 |
| 74 | WB (s) | 40S ribosomal protein S16-A | polymer | 143 | 15877.5 | 1 | UniProt (P0CX51) Pfam (PF00380) | Saccharomyces cerevisiae (baker's yeast) | RP61R,Small ribosomal subunit protein uS9-A |
| 75 | XB (t) | 40S ribosomal protein S17-A | polymer | 136 | 15820.4 | 1 | UniProt (P02407) Pfam (PF00833) | Saccharomyces cerevisiae (baker's yeast) | RP51A,Small ribosomal subunit protein eS17-A |
| 76 | YB (u) | 40S ribosomal protein S18-A | polymer | 146 | 17071.6 | 1 | UniProt (P0CX55) Pfam (PF00416) | Saccharomyces cerevisiae (baker's yeast) | Small ribosomal subunit protein uS13-A |
| 77 | ZB (v) | 40S ribosomal protein S19-A | polymer | 144 | 15942.1 | 1 | UniProt (P07280) Pfam (PF01090) | Saccharomyces cerevisiae (baker's yeast) | RP55A,S16a,Small ribosomal subunit protein eS19-A,YP45,YS16A |
| 78 | AC (w) | 40S ribosomal protein S20 | polymer | 121 | 13929.0 | 1 | UniProt (A0A6A5PVE9) | Saccharomyces cerevisiae (baker's yeast) | BJ4_G0000330.mRNA.1.CDS.1,BJ4_G0023380.mRNA.1.CDS.1,EM14S01-3B_G0053970.mRNA.1.CDS.1,HLJ1_G0023150.mRNA.1.CDS.1,HLJ1_G0054920.mRNA.1.CDS.1,HN1_G0054660.mRNA.1.CDS.1,SX2_G0054700.mRNA.1.CDS.1,Y55_G0054930.mRNA.1.CDS.1 |
| 79 | BC (x) | 40S ribosomal protein S21-A | polymer | 87 | 9758.8 | 1 | UniProt (P0C0V8) Pfam (PF01249) | Saccharomyces cerevisiae (baker's yeast) | S26,Small ribosomal subunit protein eS21-A,YS25 |
| 80 | CC (y) | 40S ribosomal protein S22-A | polymer | 130 | 14650.1 | 1 | UniProt (P0C0W1) Pfam (PF00410) | Saccharomyces cerevisiae (baker's yeast) | RP50,S24,Small ribosomal subunit protein uS8-A,YP58,YS22 |
| 81 | DC (z) | 40S ribosomal protein S23-A | polymer | 145 | 16073.9 | 1 | UniProt (P0CX29) Pfam (PF00164) | Saccharomyces cerevisiae (baker's yeast) | RP37,S28,Small ribosomal subunit protein uS12-A,YS14 |
| 82 | EC, FC, GC, HL, JL... (2, 5, 8, S, V...) | ZINC ION | non-polymer | 65.4 | 8 | Chemie (ZN) | |||
| 83 | AD, AE, AF, AG, AH... (AA, c, FF, H, MM...) | MAGNESIUM ION | non-polymer | 24.3 | 263 | Chemie (MG) | |||
| 84 | AL, DL, ED, EM, FL... (EE, MM, AA, c, Q...) | POTASSIUM ION | non-polymer | 39.1 | 19 | Chemie (K) | |||
| 85 | GK, IK, JK, LN (AA, c) | SPERMIDINE | non-polymer | 145.2 | 4 | Chemie (SPD) | |||
| 86 | WK (Bb) | METHIONINE | non-polymer | 149.2 | 1 | Chemie (MET) | |||
| 87 | AO, BO, CO, DO, EO... (GG, H, HH, J, JJ...) | water | water | 18.0 | 992 | Chemie (HOH) |
Sequence modifications
Bb, Cc: 1 - 77 (GenBank: 170517292)
| PDB | External Database | Details |
|---|---|---|
| C 18 | U 3030542 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 82 |
| Total formula weight | 3222718.5 | |
| Non-Polymers* | Number of molecules | 295 |
| Total formula weight | 8388.5 | |
| All* | Total formula weight | 3231107.0 |
