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8CF8

Eravacycline bound to the 30S head

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
16S rRNApolymer1540499197.91Escherichia coli BW25113
2B
(B)
30S ribosomal protein S2polymer24126781.71UniProt (P0A7V0)
Pfam (PF00318)
Escherichia coli BW25113Small ribosomal subunit protein uS2
3C
(C)
Small ribosomal subunit protein uS3polymer23326031.31UniProt (P0A7V3)
Pfam (PF07650)
Pfam (PF00189)
Escherichia coli BW2511330S ribosomal protein S3
4D
(G)
30S ribosomal protein S7polymer17920055.21UniProt (P02359)
Pfam (PF00177)
Escherichia coli BW25113Small ribosomal subunit protein uS7
5E
(I)
Small ribosomal subunit protein uS9polymer13014886.31UniProt (P0A7X3)
Pfam (PF00380)
Escherichia coli BW2511330S ribosomal protein S9
6F
(J)
Small ribosomal subunit protein uS10polymer10311755.61UniProt (P0A7R5)
Pfam (PF00338)
Escherichia coli BW2511330S ribosomal protein S10,Transcription termination/antitermination protein NusE
7G
(M)
Small ribosomal subunit protein uS13polymer11813128.51UniProt (P0A7S9)
Pfam (PF00416)
Escherichia coli BW2511330S ribosomal protein S13
8H
(N)
Small ribosomal subunit protein uS14polymer10111606.61UniProt (P0AG59)
Pfam (PF00253)
Escherichia coli BW2511330S ribosomal protein S14
9I
(S)
Small ribosomal subunit protein uS19polymer9210455.41UniProt (P0A7U3)
Pfam (PF00203)
Escherichia coli BW2511330S ribosomal protein S19
10J
(A)
Eravacyclinenon-polymer558.61Chemie (YQM)
11AA, BA, CA, DA, EA...
(A)
MAGNESIUM IONnon-polymer24.332Chemie (MG)
12AB, BB, QA, RA, SA...
(A, M)
POTASSIUM IONnon-polymer39.112Chemie (K)
13CB, DB, EB, FB, GB...
(A, C, G, I, J...)
waterwater18.0681Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains9
Total formula weight633898.3
Non-Polymers*Number of molecules45
Total formula weight1805.5
All*Total formula weight635703.8
*Water molecules are not included.

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PDB entries from 2025-06-18

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