8CAI
Streptomycin and Hygromycin B bound to the 30S body
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 16S rRNA | polymer | 1540 | 499238.0 | 1 | Escherichia coli BW25113 | ||
| 2 | B (B) | 30S ribosomal protein S2 | polymer | 241 | 26781.7 | 1 | UniProt (P0A7V0) Pfam (PF00318) | Escherichia coli BW25113 | Small ribosomal subunit protein uS2 |
| 3 | C (C) | Small ribosomal subunit protein uS3 | polymer | 233 | 26031.3 | 1 | UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189) | Escherichia coli BW25113 | 30S ribosomal protein S3 |
| 4 | D (D) | Small ribosomal subunit protein uS4 | polymer | 206 | 23514.2 | 1 | UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479) | Escherichia coli BW25113 | 30S ribosomal protein S4 |
| 5 | E (E) | Small ribosomal subunit protein uS5 | polymer | 167 | 17629.4 | 1 | UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) | Escherichia coli BW25113 | 30S ribosomal protein S5 |
| 6 | F (F) | Small ribosomal subunit protein bS6, non-modified isoform | polymer | 131 | 15211.1 | 1 | UniProt (P02358) Pfam (PF01250) | Escherichia coli BW25113 | |
| 7 | G (H) | Small ribosomal subunit protein uS8 | polymer | 130 | 14146.6 | 1 | UniProt (P0A7W7) Pfam (PF00410) | Escherichia coli BW25113 | 30S ribosomal protein S8 |
| 8 | H (K) | Small ribosomal subunit protein uS11 | polymer | 129 | 13872.0 | 1 | UniProt (P0A7R9) Pfam (PF00411) | Escherichia coli BW25113 | 30S ribosomal protein S11 |
| 9 | I (L) | Small ribosomal subunit protein uS12 | polymer | 124 | 13814.2 | 1 | UniProt (P0A7S3) Pfam (PF00164) | Escherichia coli BW25113 | 30S ribosomal protein S12 |
| 10 | J (O) | Small ribosomal subunit protein uS15 | polymer | 89 | 10290.8 | 1 | UniProt (P0ADZ4) Pfam (PF00312) | Escherichia coli BW25113 | 30S ribosomal protein S15 |
| 11 | K (P) | 30S ribosomal protein S16 | polymer | 82 | 9207.6 | 1 | UniProt (P0A7T3) Pfam (PF00886) | Escherichia coli BW25113 | Small ribosomal subunit protein bS16 |
| 12 | L (Q) | Small ribosomal subunit protein uS17 | polymer | 84 | 9724.5 | 1 | UniProt (P0AG63) Pfam (PF00366) | Escherichia coli BW25113 | 30S ribosomal protein S17 |
| 13 | M (R) | Small ribosomal subunit protein bS18 | polymer | 75 | 9005.5 | 1 | UniProt (P0A7T7) Pfam (PF01084) | Escherichia coli BW25113 | 30S ribosomal protein S18 |
| 14 | N (T) | 30S ribosomal protein S20 | polymer | 87 | 9708.5 | 1 | UniProt (P0A7U7) Pfam (PF01649) | Escherichia coli BW25113 | Small ribosomal subunit protein bS20 |
| 15 | O (U) | Small ribosomal subunit protein bS21 | polymer | 71 | 8524.0 | 1 | UniProt (P68679) Pfam (PF01165) | Escherichia coli BW25113 | 30S ribosomal protein S21 |
| 16 | AC, BC, CC, DC, EC... (A, D, F) | POTASSIUM ION | non-polymer | 39.1 | 29 | Chemie (K) | |||
| 17 | R, S, T (A) | HYGROMYCIN B VARIANT | non-polymer | 527.5 | 3 | Chemie (HY0) | |||
| 18 | U (A) | [(2~{S},3~{S},4~{S},5~{R},6~{S})-2-[(2~{R},3~{R},4~{R},5~{S})-2-[(1~{R},2~{S},3~{R},4~{R},5~{S},6~{R})-2,4-bis[[azaniumylidene(azanyl)methyl]amino]-3,5,6-tris(oxidanyl)cyclohexyl]oxy-4-[bis(oxidanyl)methyl]-5-methyl-4-oxidanyl-oxolan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]-methyl-azanium | non-polymer | 602.6 | 1 | Chemie (5I0) | |||
| 19 | V (A) | SPECTINOMYCIN | non-polymer | 332.4 | 1 | Chemie (SCM) | |||
| 20 | AA, AB, BA, BB, CA... (A) | MAGNESIUM ION | non-polymer | 24.3 | 55 | Chemie (MG) | |||
| 21 | AD, BD, CD, DD, ED... (A, B, C, D, E...) | water | water | 18.0 | 1416 | Chemie (HOH) |
Sequence modifications
K: 1 - 129 (UniProt: P0A7R9)
| PDB | External Database | Details |
|---|---|---|
| Ias 119 | Asn 119 | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 15 |
| Total formula weight | 706699.3 | |
| Non-Polymers* | Number of molecules | 89 |
| Total formula weight | 4988.1 | |
| All* | Total formula weight | 711687.4 |
