8CA7
Omadacycline and spectinomycin bound to the 30S ribosomal subunit head
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 16S rRNA | polymer | 1540 | 499124.8 | 1 | GenBank (2073407) | Escherichia coli BW25113 | |
| 2 | B (C) | Small ribosomal subunit protein uS3 | polymer | 233 | 26031.3 | 1 | UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189) | Escherichia coli BW25113 | 30S ribosomal protein S3 |
| 3 | C (E) | Small ribosomal subunit protein uS5 | polymer | 167 | 17629.4 | 1 | UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) | Escherichia coli BW25113 | 30S ribosomal protein S5 |
| 4 | D (G) | 30S ribosomal protein S7 | polymer | 179 | 20055.2 | 1 | UniProt (P02359) Pfam (PF00177) | Escherichia coli BW25113 | Small ribosomal subunit protein uS7 |
| 5 | E (I) | Small ribosomal subunit protein uS9 | polymer | 130 | 14886.3 | 1 | UniProt (P0A7X3) Pfam (PF00380) | Escherichia coli BW25113 | 30S ribosomal protein S9 |
| 6 | F (J) | Small ribosomal subunit protein uS10 | polymer | 103 | 11755.6 | 1 | UniProt (P0A7R5) Pfam (PF00338) | Escherichia coli BW25113 | 30S ribosomal protein S10,Transcription termination/antitermination protein NusE |
| 7 | G (M) | Small ribosomal subunit protein uS13 | polymer | 118 | 13128.5 | 1 | UniProt (P0A7S9) Pfam (PF00416) | Escherichia coli BW25113 | 30S ribosomal protein S13 |
| 8 | H (N) | Small ribosomal subunit protein uS14 | polymer | 101 | 11606.6 | 1 | UniProt (P0AG59) Pfam (PF00253) | Escherichia coli BW25113 | 30S ribosomal protein S14 |
| 9 | I (S) | Small ribosomal subunit protein uS19 | polymer | 92 | 10455.4 | 1 | UniProt (P0A7U3) Pfam (PF00203) | Escherichia coli BW25113 | 30S ribosomal protein S19 |
| 10 | J, LA, MA, NA, OA... (A) | POTASSIUM ION | non-polymer | 39.1 | 14 | Chemie (K) PubChem (813) | |||
| 11 | K (A) | Omadacycline | non-polymer | 556.6 | 1 | Chemie (U3B) PubChem (54697325) PubChem (54741061) PubChem (57724883) PubChem (54681072) PubChem (59979778) PubChem (60015408) PubChem (57724875) PubChem (59653893) PubChem (70951552) PubChem (137244732) PubChem (124586066) PubChem (125291065) PubChem (137476037) PubChem (146158798) PubChem (172873594) | |||
| 12 | L (A) | SPECTINOMYCIN | non-polymer | 332.4 | 1 | Chemie (SCM) PubChem (16757734) PubChem (2021) PubChem (25008033) PubChem (25008035) PubChem (25008036) PubChem (44120110) PubChem (59098412) PubChem (53298596) PubChem (71306861) PubChem (5702260) PubChem (71774977) PubChem (73265186) PubChem (75534862) PubChem (15541) PubChem (6604362) PubChem (6604671) PubChem (7048798) PubChem (7067793) PubChem (71752167) PubChem (91393002) PubChem (11865469) PubChem (11865471) PubChem (11865473) PubChem (11865475) PubChem (93474248) PubChem (95566334) PubChem (95566335) PubChem (95566336) PubChem (97050499) PubChem (15558351) PubChem (7048796) PubChem (124771612) PubChem (117072393) PubChem (117986677) PubChem (124304444) PubChem (124352394) PubChem (124771609) PubChem (124771610) PubChem (124771611) PubChem (126963502) PubChem (129010452) PubChem (132067192) PubChem (134693173) PubChem (137704781) PubChem (137705153) PubChem (140326108) PubChem (146157559) PubChem (146247383) PubChem (162973090) PubChem (162973091) PubChem (164773707) | |||
| 13 | AA, BA, CA, DA, EA... (A, M) | MAGNESIUM ION | non-polymer | 24.3 | 26 | Chemie (MG) PubChem (888) | |||
| 14 | AB, BB, CB, DB, EB... (C, G, I, J, M...) | water | water | 18.0 | 543 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 624672.9 | |
| Non-Polymers* | Number of molecules | 42 |
| Total formula weight | 2068.3 | |
| All* | Total formula weight | 626741.2 |
