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8C41

High resolution structure of the Streptococcus pneumoniae topoisomerase IV-DNA complex with the novel fluoroquinolone Delafloxacin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BFused ParE30ParC55 CLEAVAGE COMPLEX of the TOPOISOMERASE IVpolymer74284211.42Pfam (PF00521)
UniProt (by SIFTS) (P72525)
In PDB
Streptococcus pneumoniae
2EDNA (5'-D(*CP*AP*TP*GP*AP*AP*T)-3')polymer72121.41DNA molecule
3FDNA (5'-D(P*AP*GP*TP*CP*AP*TP*TP*CP*AP*TP*G)-3')polymer113348.21DNA molecule
4GDNA (5'-D(*CP*GP*TP*GP*CP*AP*T)-3')polymer72113.41DNA molecule
5HDNA (5'-D(P*GP*AP*CP*TP*AP*TP*GP*CP*AP*CP*G)-3')polymer113358.21DNA molecule
6A, B(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.23Chemie (MPD)
7A, BMAGNESIUM IONnon-polymer24.36Chemie (MG)
8A, BCHLORIDE IONnon-polymer35.52Chemie (CL)
9F, Hdelafloxacinnon-polymer440.82Chemie (TE9)
10waterwater18.0418Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight179364.1
Non-Polymers*Number of molecules13
Total formula weight1452.8
All*Total formula weight180816.9
*Water molecules are not included.

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PDB entries from 2024-07-10

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