8BWS
Structure of yeast RNA Polymerase III elongation complex at 3.3 A
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | DNA-directed RNA polymerase III subunit RPC1 | polymer | 1460 | 162517.8 | 1 | UniProt (P04051) Pfam (PF04997) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF04998) In PDB | Saccharomyces cerevisiae S288C | RNA polymerase III subunit C1,DNA-directed RNA polymerase III largest subunit,RNA polymerase III subunit C160 |
2 | B | DNA-directed RNA polymerase III subunit RPC2 | polymer | 1149 | 129629.4 | 1 | UniProt (P22276) Pfam (PF04567) Pfam (PF00562) Pfam (PF04560) Pfam (PF04563) Pfam (PF04561) Pfam (PF04565) Pfam (PF04566) In PDB | Saccharomyces cerevisiae S288C | RNA polymerase III subunit C2,C128,DNA-directed RNA polymerase III 130 kDa polypeptide |
3 | C | DNA-directed RNA polymerases I and III subunit RPAC1 | polymer | 335 | 37732.6 | 1 | UniProt (P07703) Pfam (PF01193) Pfam (PF01000) In PDB | Saccharomyces cerevisiae S288C | RNA polymerases I and III subunit AC1,C37,DNA-directed RNA polymerases I and III 40 kDa polypeptide,C40 |
4 | D | DNA-directed RNA polymerase III subunit RPC9 | polymer | 161 | 18623.1 | 1 | UniProt (P47076) Pfam (PF03874) In PDB | Saccharomyces cerevisiae S288C | RNA polymerase III subunit C9,RNA polymerase III subunit C17 |
5 | E | DNA-directed RNA polymerases I, II, and III subunit RPABC1 | polymer | 215 | 25117.1 | 1 | UniProt (P20434) Pfam (PF03871) Pfam (PF01191) In PDB | Saccharomyces cerevisiae S288C | RNA polymerases I,II,and III subunit ABC1,ABC27,DNA-directed RNA polymerases I,and III 27 kDa polypeptide |
6 | F | DNA-directed RNA polymerases I, II, and III subunit RPABC2 | polymer | 155 | 17931.8 | 1 | UniProt (P20435) Pfam (PF01192) In PDB | Saccharomyces cerevisiae S288C | RNA polymerases I,II,and III subunit ABC2,ABC23,DNA-directed RNA polymerases I,and III 23 kDa polypeptide |
7 | G | DNA-directed RNA polymerase III subunit RPC8 | polymer | 212 | 24349.8 | 1 | UniProt (P35718) Pfam (PF03876) Pfam (PF08292) In PDB | Saccharomyces cerevisiae S288C | RNA polymerase III subunit C8,DNA-directed RNA polymerase III 25 kDa polypeptide,RNA polymerase III subunit C25 |
8 | H | DNA-directed RNA polymerases I, II, and III subunit RPABC3 | polymer | 146 | 16525.4 | 1 | UniProt (P20436) Pfam (PF03870) In PDB | Saccharomyces cerevisiae S288C | |
9 | I | DNA-directed RNA polymerase III subunit RPC10 | polymer | 110 | 12525.1 | 1 | UniProt (Q04307) Pfam (PF02150) Pfam (PF01096) In PDB | Saccharomyces cerevisiae S288C | RNA polymerase III subunit C10,DNA-directed RNA polymerases III 12.5 kDa polypeptide,RNA polymerase III subunit C11 |
10 | J | DNA-directed RNA polymerases I, II, and III subunit RPABC5 | polymer | 70 | 8290.7 | 1 | UniProt (P22139) Pfam (PF01194) In PDB | Saccharomyces cerevisiae S288C | RNA polymerases I,II,and III subunit ABC5,ABC10-beta,ABC8,DNA-directed RNA polymerases I,and III 8.3 kDa polypeptide |
11 | K | DNA-directed RNA polymerases I and III subunit RPAC2 | polymer | 142 | 16167.9 | 1 | UniProt (P28000) Pfam (PF13656) In PDB | Saccharomyces cerevisiae S288C | RNA polymerases I and III subunit AC2,AC19,DNA-directed RNA polymerases I and III 16 kDa polypeptide,RPA19 |
12 | L | DNA-directed RNA polymerases I, II, and III subunit RPABC4 | polymer | 76 | 8240.6 | 1 | UniProt (P40422) Pfam (PF03604) In PDB | Saccharomyces cerevisiae S288C | RNA polymerases I,II,and III subunit ABC4,ABC10-alpha |
13 | M | DNA-directed RNA polymerase III subunit RPC5 | polymer | 282 | 32178.1 | 1 | UniProt (P36121) Pfam (PF04801) In PDB | Saccharomyces cerevisiae S288C | RNA polymerase III subunit C5,DNA-directed RNA polymerase III 37 kDa polypeptide,RNA polymerase III subunit C37 |
14 | N | DNA-directed RNA polymerase III subunit RPC4 | polymer | 422 | 46751.5 | 1 | UniProt (P25441) Pfam (PF05132) In PDB | Saccharomyces cerevisiae S288C | RNA polymerase III subunit C4,C53,DNA-directed RNA polymerase III 47 kDa polypeptide |
15 | O | DNA-directed RNA polymerase III subunit RPC3 | polymer | 654 | 74112.8 | 1 | UniProt (P32349) Pfam (PF08221) Pfam (PF05645) Pfam (PF22536) Pfam (PF20912) In PDB | Saccharomyces cerevisiae S288C | RNA polymerase III subunit C3,C82,DNA-directed III 74 kDa polypeptide,C74 |
16 | P | DNA-directed RNA polymerase III subunit RPC6 | polymer | 317 | 36174.2 | 1 | UniProt (P32910) Pfam (PF05158) In PDB | Saccharomyces cerevisiae S288C | RNA polymerase III subunit C6,C34,DNA-directed RNA polymerase III 36 kDa polypeptide |
17 | Q | DNA-directed RNA polymerase III subunit RPC7 | polymer | 251 | 27753.0 | 1 | UniProt (P17890) Pfam (PF11705) In PDB | Saccharomyces cerevisiae S288C | RNA polymerase III subunit C7,DNA-directed RNA polymerase III 31 kDa polypeptide,C31 |
18 | S | Non-template DNA | polymer | 52 | 16039.3 | 1 | Saccharomyces cerevisiae S288C | ||
19 | T | Template DNA | polymer | 52 | 15816.1 | 1 | Saccharomyces cerevisiae S288C | ||
20 | R | RNA | polymer | 10 | 3264.0 | 1 | Saccharomyces cerevisiae S288C | ||
21 | I, J, L, A, B | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
22 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
23 | I, A, C | (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol | non-polymer | 378.6 | 3 | Chemie (4QM) |
Sequence modifications
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 20 |
Total formula weight | 729740.2 | |
Non-Polymers* | Number of molecules | 10 |
Total formula weight | 1552.5 | |
All* | Total formula weight | 731292.8 |