Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8BU6

Structure of DDB1 bound to DS55-engaged CDK12-cyclin K

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1G, D, ADNA damage-binding protein 1polymer84093675.43UniProt (Q16531)
Pfam (PF10433)
Pfam (PF03178)
In PDB
Homo sapiens (human)DDB p127 subunit,DNA damage-binding protein a,DDBa,Damage-specific DNA-binding protein 1,HBV X-associated protein 1,XAP-1,UV-damaged DNA-binding factor,UV-damaged DNA-binding protein 1,UV-DDB 1,XPE-binding factor,XPE-BF,Xeroderma pigmentosum group E-complementing protein,XPCe
2H, E, BCyclin-dependent kinase 12polymer34440143.33UniProt (Q9NYV4)
Pfam (PF00069)
In PDB
Homo sapiens (human)Cdc2-related kinase,arginine/serine-rich,CrkRS,Cell division cycle 2-related protein kinase 7,CDC2-related protein kinase 7,Cell division protein kinase 12,hCDK12
3I, F, CCyclin-Kpolymer27131700.53UniProt (O75909)
Pfam (PF00134)
Pfam (PF21797)
In PDB
Homo sapiens (human)
4G, I, F, A, CSULFATE IONnon-polymer96.16Chemie (SO4)
5H, E, B~{N}-(1~{H}-benzimidazol-2-ylmethyl)-9-(1-methylpyrazol-4-yl)-2-morpholin-4-yl-purin-6-aminenon-polymer430.53Chemie (RQE)
Sequence modifications
G, D, A: 1 - 699 (UniProt: Q16531)
PDBExternal DatabaseDetails
Gly -3-expression tag
Gly -2-expression tag
Gly -1-expression tag
Arg 0-expression tag
G, D, A: 709 - 1140 (UniProt: Q16531)
PDBExternal DatabaseDetails
Gly 700-linker
Asn 701-linker
Gly 702-linker
Asn 703-linker
Ser 704-linker
Gly 705-linker
Glu 706-linker
Ile 707-linker
Gln 708-linker
H, E, B: 712 - 1051 (UniProt: Q9NYV4)
PDBExternal DatabaseDetails
Gly 709-expression tag
Gly 710-expression tag
Gly 711-expression tag
Arg 965Lys 965engineered mutation
Gln 1052-expression tag
I, F, C: 1 - 267 (UniProt: O75909)
PDBExternal DatabaseDetails
Gly -3-expression tag
Gly -2-expression tag
Gly -1-expression tag
Arg 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains9
Total formula weight496557.7
Non-Polymers*Number of molecules9
Total formula weight1867.8
All*Total formula weight498425.5
*Water molecules are not included.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon