Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Outer capsid protein VP4 | polymer | 776 | 86768.0 | 3 | UniProt (A0A1Q2TSK9) Pfam (PF00426) Pfam (PF17477) Pfam (PF17478) In PDB | Rotavirus A | |
2 | D, E, F, G, H... | Outer capsid glycoprotein VP7 | polymer | 326 | 37230.7 | 13 | UniProt (A0A1Q2TSM6) Pfam (PF00434) In PDB | Rotavirus A | |
3 | d, e, f, g, h... | Intermediate capsid protein VP6 | polymer | 397 | 44910.7 | 13 | UniProt (A2T3S6) Pfam (PF00980) In PDB | Rotavirus A | |
4 | q, r | Inner capsid protein VP2 | polymer | 882 | 102413.0 | 2 | UniProt (A2T3R1) Pfam (PF05087) In PDB | Rotavirus A | |
5 | K, L, D, M, E... | CALCIUM ION | non-polymer | 40.1 | 39 | Chemie (CA) | |||
6 | e, g, j, m, p | ZINC ION | non-polymer | 65.4 | 5 | Chemie (ZN) |
Sequence modifications
A, B, C: 1 - 776 (UniProt: A0A1Q2TSK9)
q, r: -1 - 880 (UniProt: A2T3R1)
PDB | External Database | Details |
---|---|---|
Thr 185 | Arg 185 | conflict |
Met 323 | Val 323 | conflict |
Ser 737 | Thr 737 | conflict |
Arg 738 | Lys 738 | conflict |
PDB | External Database | Details |
---|---|---|
Ala 118 | Lys 120 | conflict |
Arg 129 | Lys 131 | conflict |
Lys 131 | Leu 133 | conflict |
Ile 135 | Arg 137 | conflict |
Lys 140 | Arg 142 | conflict |
Arg 142 | Leu 144 | conflict |
Ile 146 | Trp 148 | conflict |
Lys 152 | Arg 154 | conflict |
Thr 175 | Met 177 | conflict |
Ser 206 | Ala 208 | conflict |
Ala 222 | Arg 224 | conflict |
Tyr 250 | His 252 | conflict |
Val 414 | Ile 416 | conflict |
Val 432 | Ile 434 | conflict |
Ile 436 | Val 438 | conflict |
Val 438 | Pro 440 | conflict |
Asn 477 | Tyr 479 | conflict |
Tyr 479 | Gln 481 | conflict |
Ile 503 | Val 505 | conflict |
Ala 551 | Ser 553 | conflict |
Ser 553 | Asn 555 | conflict |
Val 561 | Ile 563 | conflict |
Ala 640 | Ser 642 | conflict |
His 650 | Gln 652 | conflict |
Val 656 | Arg 658 | conflict |
Ala 657 | Val 659 | conflict |
Val 676 | Ile 678 | conflict |
Leu 686 | Ala 688 | conflict |
Ala 688 | Asn 690 | conflict |
Asp 690 | Glu 692 | conflict |
Thr 741 | Ser 743 | conflict |
Ser 743 | Asp 745 | conflict |
Val 766 | Ile 768 | conflict |
Ile 777 | Lys 779 | conflict |
Val 818 | Ile 820 | conflict |
Ile 820 | Thr 822 | conflict |
Val 831 | Gln 833 | conflict |
Asn 837 | Ala 839 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 31 |
Total formula weight | 1532968.0 | |
Non-Polymers* | Number of molecules | 44 |
Total formula weight | 1890.1 | |
All* | Total formula weight | 1534858.1 |