8BLJ
Crystal structure of the ligand-binding domain (LBD) of human iGluR Delta-1 (GluD1), apo state
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Glutamate receptor ionotropic, delta-1,Isoform 2 of Glutamate receptor ionotropic, delta-1 | polymer | 282 | 31347.4 | 6 | UniProt (Q9ULK0) UniProt (Q9ULK0-2) Pfam (PF10613) Pfam (PF00060) | Homo sapiens (human) | GluD1,GluR delta-1 subunit |
| 2 | AA, BA, G, H, I... (F, A, B, C, D...) | CALCIUM ION | non-polymer | 40.1 | 11 | Chemie (CA) | |||
| 3 | J, K, R, S, Y (A, C, E) | CHLORIDE ION | non-polymer | 35.5 | 5 | Chemie (CL) | |||
| 4 | CA, L, O, T, W... (F, A, B, C, D...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
| 5 | U (C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 6 | DA, EA, FA, GA, HA... (A, B, C, D, E...) | water | water | 18.0 | 290 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 436 - 547 (UniProt: Q9ULK0)
A, B, C, D, E, F: 664 - 823 (UniProt: Q9ULK0-2)
| PDB | External Database | Details |
|---|---|---|
| Gly 548 | - | linker |
| Thr 549 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Gly 824 | - | expression tag |
| Thr 825 | - | expression tag |
| Leu 826 | - | expression tag |
| Glu 827 | - | expression tag |
| Val 828 | - | expression tag |
| Leu 829 | - | expression tag |
| Phe 830 | - | expression tag |
| Gln 831 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 188084.5 | |
| Non-Polymers* | Number of molecules | 23 |
| Total formula weight | 2007.4 | |
| All* | Total formula weight | 190092.0 |
