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8BJK

X-ray structure of Danio rerio histone deacetylase 6 (HDAC6) CD2 in complex with an inhibitor CPD11352

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Histone deacetylase 6polymer35939899.11UniProt (F8W4B7)
Pfam (PF00850)
Danio rerio (zebrafish)
2B
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
3C, D
(A)
POTASSIUM IONnon-polymer39.12Chemie (K)
4E
(A)
~{N}-[[5-(aminocarbamoyl)pyridin-2-yl]methyl]-~{N}-(3-chlorophenyl)methanesulfonamidenon-polymer354.81Chemie (QXF)
5F
(A)
waterwater18.0369Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight39899.1
Non-Polymers*Number of molecules4
Total formula weight498.4
All*Total formula weight40397.5
*Water molecules are not included.

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PDB entries from 2026-01-14

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