8BG2
Crystal structure of the SARS-CoV-2 S RBD in complex with pT1580 scFV
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | pT1375 single-chain Fv | polymer | 251 | 26381.0 | 2 | Homo sapiens | pT1375 scFV | |
| 2 | B, D (B, D) | Spike protein S1 | polymer | 199 | 22361.9 | 2 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 | |
| 3 | E, F (B, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 4 | G, H, I, J (A, B, C, D) | water | water | 18.0 | 441 | Chemie (HOH) |
Sequence modifications
B, D: 334 - 527 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Asp 528 | - | expression tag |
| Asp 529 | - | expression tag |
| Asp 530 | - | expression tag |
| Asp 531 | - | expression tag |
| Lys 532 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 97485.9 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 442.4 | |
| All* | Total formula weight | 97928.4 |
