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8BE3

Crystal structure of KRasG12V-Nanobody84

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(AA0A, A00A)
Nanobody84polymer12213519.12Lama glama
2B, C
(R, A)
Isoform 2B of GTPase KRaspolymer19021675.32UniProt (P01116-2)
Pfam (PF00071)
UniProt (by SIFTS) (P01116)
Homo sapiens (human)K-Ras 2,Ki-Ras,c-K-ras,c-Ki-ras
3E, G
(R, A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
4F, H
(R, A)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.22Chemie (GDP)
5I, J, K, L
(AA0A, R, A, A00A)
waterwater18.0350Chemie (HOH)
Sequence modifications
R, A: 1 - 169 (UniProt: P01116-2)
PDBExternal DatabaseDetails
Met -20-initiating methionine
Gly -19-expression tag
Ser -18-expression tag
Ser -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
Ser -10-expression tag
Ser -9-expression tag
Gly -8-expression tag
Glu -7-expression tag
Asn -6-expression tag
Leu -5-expression tag
Tyr -4-expression tag
Phe -3-expression tag
Gln -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Val 12Gly 12engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight70388.7
Non-Polymers*Number of molecules4
Total formula weight935.0
All*Total formula weight71323.8
*Water molecules are not included.

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PDB entries from 2025-06-25

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