8BBY
VarB H/L (SLPL/SLPH) complex from C. difficile SlpA (R20291 strain)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | S-layer protein | polymer | 320 | 34291.7 | 2 | UniProt (B3GV24) Pfam (PF12211) | Clostridioides difficile R20291 | |
| 2 | B, D (B, D) | S-layer protein | polymer | 416 | 44227.2 | 2 | UniProt (Q9AEM3) Pfam (PF04122) UniProt (by SIFTS) (B3GV24) | Clostridioides difficile R20291 | S-layer protein SlpA |
| 3 | E, F (B, D) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 4 | G, H, I, J (A, B, C, D) | water | water | 18.0 | 32 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 320 (UniProt: B3GV24)
| PDB | External Database | Details |
|---|---|---|
| Leu 60 | Ala 84 | conflict |
| Val 61 | Glu 85 | conflict |
| Gln 62 | Asp 86 | conflict |
| Lys 63 | Ala 87 | conflict |
| Met 64 | Ser 88 | conflict |
| Gln 65 | Lys 89 | conflict |
| Val 66 | Leu 90 | conflict |
| Asn 67 | - | insertion |
| Tyr 68 | - | insertion |
| Cys 69 | Leu 91 | conflict |
| Leu 70 | Phe 92 | conflict |
| His 71 | Thr 93 | conflict |
| Lys 72 | Gln 94 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 157037.7 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 46.0 | |
| All* | Total formula weight | 157083.7 |
