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8B9C

S. cerevisiae pol alpha - replisome complex

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(2)
DNA replication licensing factor MCM2polymer86898911.51UniProt (P29469)
Pfam (PF12619)
Pfam (PF14551)
Pfam (PF17207)
Pfam (PF00493)
Pfam (PF17855)
Saccharomyces cerevisiae (baker's yeast)Minichromosome maintenance protein 2
2B
(3)
DNA replication licensing factor MCM3polymer1009111987.61UniProt (P24279)
Pfam (PF22207)
Pfam (PF14551)
Pfam (PF17207)
Pfam (PF00493)
Pfam (PF17855)
Saccharomyces cerevisiae (baker's yeast)Minichromosome maintenance protein 3
3C
(4)
DNA replication licensing factor MCM4polymer933105138.41UniProt (P30665)
Pfam (PF14551)
Pfam (PF17207)
Pfam (PF00493)
Pfam (PF17855)
Pfam (PF21128)
Saccharomyces cerevisiae (baker's yeast)Cell division control protein 54
4D
(5)
Minichromosome maintenance protein 5polymer77586505.71UniProt (P29496)
Pfam (PF14551)
Pfam (PF17207)
Pfam (PF00493)
Pfam (PF17855)
Pfam (PF21933)
Saccharomyces cerevisiae (baker's yeast)Cell division control protein 46
5E
(6)
DNA replication licensing factor MCM6polymer1017113110.21UniProt (P53091)
Pfam (PF14551)
Pfam (PF17207)
Pfam (PF00493)
Pfam (PF17855)
Pfam (PF18263)
Saccharomyces cerevisiae (baker's yeast)Minichromosome maintenance protein 6
6F
(7)
DNA replication licensing factor MCM7polymer84595049.91UniProt (P38132)
Pfam (PF14551)
Pfam (PF17207)
Pfam (PF00493)
Pfam (PF17855)
Saccharomyces cerevisiae (baker's yeast)Cell division control protein 47,Minichromosome maintenance protein 7
7G
(A)
DNA primase large subunitpolymer52862348.61UniProt (P20457)
Pfam (PF04104)
Saccharomyces cerevisiae (baker's yeast)DNA polymerase alpha:primase complex p58 subunit,DNA polymerase-primase complex p58 subunit,Pol alpha-primase complex p58 subunit,DNA primase 58 kDa subunit
8H
(B)
DNA polymerase alpha subunit Bpolymer70578865.91UniProt (P38121)
Pfam (PF22062)
Pfam (PF04042)
Saccharomyces cerevisiae (baker's yeast)DNA polymerase I subunit B,DNA polymerase alpha:primase complex p86 subunit,Pol alpha-primase complex p86 subunit,DNA polymerase-primase complex p74 subunit
9I
(C)
DNA replication complex GINS protein PSF1polymer20824230.61UniProt (Q12488)
Pfam (PF05916)
Saccharomyces cerevisiae (baker's yeast)Partner of Sld five 1
10J
(D)
DNA replication complex GINS protein PSF2polymer21325096.81UniProt (P40359)
Pfam (PF05916)
Saccharomyces cerevisiae (baker's yeast)Partner of Sld five 2
11K
(E)
DNA replication complex GINS protein PSF3polymer21724437.91UniProt (Q12146)
Pfam (PF22466)
Pfam (PF05916)
Saccharomyces cerevisiae (baker's yeast)Partner of Sld five 3
12L
(F)
DNA replication complex GINS protein SLD5polymer29433983.61UniProt (Q03406)
Pfam (PF05916)
Pfam (PF16922)
Saccharomyces cerevisiae (baker's yeast)
13M
(G)
Cell division control protein 45polymer65775154.71UniProt (Q08032)
Pfam (PF02724)
Saccharomyces cerevisiae (baker's yeast)
14N
(P)
Mediator of replication checkpoint protein 1polymer1109126078.91UniProt (P25588)
Pfam (PF09444)
Saccharomyces cerevisiae (baker's yeast)DNA replication checkpoint mediator MRC1
15O
(Q)
Leading strandpolymer8426092.61Saccharomyces cerevisiae
16P
(R)
Lagging strandpolymer10632046.51Saccharomyces cerevisiae
17Q
(S)
DNA primase small subunitpolymer44451827.11UniProt (P10363)
Pfam (PF01896)
Saccharomyces cerevisiae (baker's yeast)DNA polymerase alpha:primase complex p48 subunit,DNA polymerase-primase complex p48 subunit,Pol alpha-primase complex p48 subunit,DNA primase 48 kDa subunit
18R
(X)
Topoisomerase 1-associated factor 1polymer1238141296.91UniProt (P53840)
Pfam (PF04821)
Saccharomyces cerevisiae (baker's yeast)
19S
(Y)
Chromosome segregation in meiosis protein 3polymer31936588.81UniProt (Q04659)
Pfam (PF07962)
Saccharomyces cerevisiae (baker's yeast)
20T
(J)
DNA polymerase alpha catalytic subunit Apolymer1468167027.81UniProt (P13382)
Pfam (PF12254)
Pfam (PF03104)
Pfam (PF00136)
Pfam (PF08996)
Saccharomyces cerevisiae (baker's yeast)DNA polymerase I subunit A,DNA polymerase alpha:primase complex p180 subunit,DNA polymerase-primase complex p180 subunit,Pol alpha-primase complex p180 subunit
21DA, U, W, X
(7, 2, 3, 4)
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.24Chemie (ANP)
22AA, EA, V, Y
(5, 7, 2, 4)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
23BA, CA, FA, Z
(5, 6, 7, 4)
ZINC IONnon-polymer65.44Chemie (ZN)
Sequence modifications
3: 1 - 971 (UniProt: P24279)
PDBExternal DatabaseDetails
Met -37-initiating methionine
Lys -36-expression tag
Arg -35-expression tag
Arg -34-expression tag
Trp -33-expression tag
Lys -32-expression tag
Lys -31-expression tag
Asn -30-expression tag
Phe -29-expression tag
Ile -28-expression tag
Ala -27-expression tag
Val -26-expression tag
Ser -25-expression tag
Ala -24-expression tag
Ala -23-expression tag
Asn -22-expression tag
Arg -21-expression tag
Phe -20-expression tag
Lys -19-expression tag
Lys -18-expression tag
Ile -17-expression tag
Ser -16-expression tag
Ser -15-expression tag
Ser -14-expression tag
Gly -13-expression tag
Ala -12-expression tag
Leu -11-expression tag
Glu -10-expression tag
Asn -9-expression tag
Leu -8-expression tag
Tyr -7-expression tag
Phe -6-expression tag
Gln -5-expression tag
Gly -4-expression tag
Glu -3-expression tag
Ala -2-expression tag
Pro -1-expression tag
Val 0-expression tag
E: 1 - 194 (UniProt: Q12146)
PDBExternal DatabaseDetails
Met -22-initiating methionine
Gly -21-expression tag
Ser -20-expression tag
Ser -19-expression tag
His -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
Ser -12-expression tag
Ser -11-expression tag
Gly -10-expression tag
Leu -9-expression tag
Val -8-expression tag
Pro -7-expression tag
Arg -6-expression tag
Gly -5-expression tag
Ser -4-expression tag
His -3-expression tag
Met -2-expression tag
Ala -1-expression tag
Ser 0-expression tag
G: 1 - 167 (UniProt: Q08032)
G: 167 - 650 (UniProt: Q08032)
PDBExternal DatabaseDetails
Tyr 167-linker
Lys 167-linker
Asp 167-linker
Asp 167-linker
Asp 167-linker
Gly 167-linker
Asp 167-linker
Tyr 167-linker
Lys 167-linker
Asp 167-linker
Asp 167-linker
P: 1 - 1096 (UniProt: P25588)
PDBExternal DatabaseDetails
Asp 1097-expression tag
Tyr 1098-expression tag
Lys 1099-expression tag
Asp 1100-expression tag
Asp 1101-expression tag
Asp 1102-expression tag
Gly 1103-expression tag
Asp 1104-expression tag
Tyr 1105-expression tag
Lys 1106-expression tag
Asp 1107-expression tag
Asp 1108-expression tag
Asp 1109-expression tag
S: 1 - 409 (UniProt: P10363)
PDBExternal DatabaseDetails
Met -34-initiating methionine
Lys -33-expression tag
Arg -32-expression tag
Arg -31-expression tag
Trp -30-expression tag
Lys -29-expression tag
Lys -28-expression tag
Asn -27-expression tag
Phe -26-expression tag
Ile -25-expression tag
Ala -24-expression tag
Val -23-expression tag
Ser -22-expression tag
Ala -21-expression tag
Ala -20-expression tag
Asn -19-expression tag
Arg -18-expression tag
Phe -17-expression tag
Lys -16-expression tag
Lys -15-expression tag
Ile -14-expression tag
Ser -13-expression tag
Ser -12-expression tag
Ser -11-expression tag
Gly -10-expression tag
Ala -9-expression tag
Leu -8-expression tag
Glu -7-expression tag
Asn -6-expression tag
Leu -5-expression tag
Tyr -4-expression tag
Phe -3-expression tag
Gln -2-expression tag
Gly -1-expression tag
Glu 0-expression tag
Y: 1 - 317 (UniProt: Q04659)
PDBExternal DatabaseDetails
Gly -1-expression tag
Glu 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains20
Total formula weight1515779.8
Non-Polymers*Number of molecules12
Total formula weight2383.6
All*Total formula weight1518163.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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