Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8B9C

S. cerevisiae pol alpha - replisome complex

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
20000727biological_processdouble-strand break repair via break-induced replication
20003677molecular_functionDNA binding
20003682molecular_functionchromatin binding
20003688molecular_functionDNA replication origin binding
20003697molecular_functionsingle-stranded DNA binding
20004386molecular_functionhelicase activity
20005515molecular_functionprotein binding
20005524molecular_functionATP binding
20005634cellular_componentnucleus
20005654cellular_componentnucleoplasm
20005656cellular_componentnuclear pre-replicative complex
20005737cellular_componentcytoplasm
20006260biological_processDNA replication
20006267biological_processpre-replicative complex assembly involved in nuclear cell cycle DNA replication
20006268biological_processDNA unwinding involved in DNA replication
20006270biological_processDNA replication initiation
20006271biological_processDNA strand elongation involved in DNA replication
20006279biological_processpremeiotic DNA replication
20006974biological_processDNA damage response
20008270molecular_functionzinc ion binding
20016787molecular_functionhydrolase activity
20016887molecular_functionATP hydrolysis activity
20017116molecular_functionsingle-stranded DNA helicase activity
20031261cellular_componentDNA replication preinitiation complex
20031298cellular_componentreplication fork protection complex
20032508biological_processDNA duplex unwinding
20042555cellular_componentMCM complex
20043138molecular_function3'-5' DNA helicase activity
20043596cellular_componentnuclear replication fork
20046872molecular_functionmetal ion binding
20071162cellular_componentCMG complex
21902975biological_processmitotic DNA replication initiation
21905775biological_processnegative regulation of DNA helicase activity
30000727biological_processdouble-strand break repair via break-induced replication
30000781cellular_componentchromosome, telomeric region
30003677molecular_functionDNA binding
30003682molecular_functionchromatin binding
30003688molecular_functionDNA replication origin binding
30003697molecular_functionsingle-stranded DNA binding
30004386molecular_functionhelicase activity
30005515molecular_functionprotein binding
30005524molecular_functionATP binding
30005634cellular_componentnucleus
30005654cellular_componentnucleoplasm
30005656cellular_componentnuclear pre-replicative complex
30005737cellular_componentcytoplasm
30006260biological_processDNA replication
30006267biological_processpre-replicative complex assembly involved in nuclear cell cycle DNA replication
30006268biological_processDNA unwinding involved in DNA replication
30006270biological_processDNA replication initiation
30006271biological_processDNA strand elongation involved in DNA replication
30006279biological_processpremeiotic DNA replication
30016787molecular_functionhydrolase activity
30016887molecular_functionATP hydrolysis activity
30017116molecular_functionsingle-stranded DNA helicase activity
30030466biological_processsilent mating-type cassette heterochromatin formation
30031261cellular_componentDNA replication preinitiation complex
30031298cellular_componentreplication fork protection complex
30031509biological_processsubtelomeric heterochromatin formation
30032508biological_processDNA duplex unwinding
30042555cellular_componentMCM complex
30043596cellular_componentnuclear replication fork
30071162cellular_componentCMG complex
31902975biological_processmitotic DNA replication initiation
31904931molecular_functionMCM complex binding
40000727biological_processdouble-strand break repair via break-induced replication
40003677molecular_functionDNA binding
40003678molecular_functionDNA helicase activity
40003688molecular_functionDNA replication origin binding
40003697molecular_functionsingle-stranded DNA binding
40004386molecular_functionhelicase activity
40005515molecular_functionprotein binding
40005524molecular_functionATP binding
40005634cellular_componentnucleus
40005654cellular_componentnucleoplasm
40005656cellular_componentnuclear pre-replicative complex
40005737cellular_componentcytoplasm
40006260biological_processDNA replication
40006267biological_processpre-replicative complex assembly involved in nuclear cell cycle DNA replication
40006268biological_processDNA unwinding involved in DNA replication
40006270biological_processDNA replication initiation
40006271biological_processDNA strand elongation involved in DNA replication
40006279biological_processpremeiotic DNA replication
40008270molecular_functionzinc ion binding
40009378molecular_functionfour-way junction helicase activity
40016787molecular_functionhydrolase activity
40016887molecular_functionATP hydrolysis activity
40017116molecular_functionsingle-stranded DNA helicase activity
40031261cellular_componentDNA replication preinitiation complex
40031298cellular_componentreplication fork protection complex
40032508biological_processDNA duplex unwinding
40033260biological_processnuclear DNA replication
40042555cellular_componentMCM complex
40043138molecular_function3'-5' DNA helicase activity
40043596cellular_componentnuclear replication fork
40071162cellular_componentCMG complex
40097373cellular_componentMCM core complex
41902975biological_processmitotic DNA replication initiation
50000727biological_processdouble-strand break repair via break-induced replication
50000781cellular_componentchromosome, telomeric region
50003677molecular_functionDNA binding
50003682molecular_functionchromatin binding
50003688molecular_functionDNA replication origin binding
50003697molecular_functionsingle-stranded DNA binding
50004386molecular_functionhelicase activity
50005515molecular_functionprotein binding
50005524molecular_functionATP binding
50005634cellular_componentnucleus
50005654cellular_componentnucleoplasm
50005656cellular_componentnuclear pre-replicative complex
50005737cellular_componentcytoplasm
50006260biological_processDNA replication
50006267biological_processpre-replicative complex assembly involved in nuclear cell cycle DNA replication
50006268biological_processDNA unwinding involved in DNA replication
50006270biological_processDNA replication initiation
50006279biological_processpremeiotic DNA replication
50006368biological_processtranscription elongation by RNA polymerase II
50008270molecular_functionzinc ion binding
50016787molecular_functionhydrolase activity
50016887molecular_functionATP hydrolysis activity
50017116molecular_functionsingle-stranded DNA helicase activity
50030174biological_processregulation of DNA-templated DNA replication initiation
50031261cellular_componentDNA replication preinitiation complex
50031298cellular_componentreplication fork protection complex
50031507biological_processheterochromatin formation
50031509biological_processsubtelomeric heterochromatin formation
50032508biological_processDNA duplex unwinding
50033260biological_processnuclear DNA replication
50042555cellular_componentMCM complex
50043138molecular_function3'-5' DNA helicase activity
50043596cellular_componentnuclear replication fork
50071162cellular_componentCMG complex
60000727biological_processdouble-strand break repair via break-induced replication
60003677molecular_functionDNA binding
60003678molecular_functionDNA helicase activity
60003688molecular_functionDNA replication origin binding
60003697molecular_functionsingle-stranded DNA binding
60004386molecular_functionhelicase activity
60005515molecular_functionprotein binding
60005524molecular_functionATP binding
60005634cellular_componentnucleus
60005654cellular_componentnucleoplasm
60005656cellular_componentnuclear pre-replicative complex
60005737cellular_componentcytoplasm
60006260biological_processDNA replication
60006267biological_processpre-replicative complex assembly involved in nuclear cell cycle DNA replication
60006268biological_processDNA unwinding involved in DNA replication
60006270biological_processDNA replication initiation
60006271biological_processDNA strand elongation involved in DNA replication
60006279biological_processpremeiotic DNA replication
60008270molecular_functionzinc ion binding
60009378molecular_functionfour-way junction helicase activity
60016787molecular_functionhydrolase activity
60016887molecular_functionATP hydrolysis activity
60017116molecular_functionsingle-stranded DNA helicase activity
60031261cellular_componentDNA replication preinitiation complex
60031298cellular_componentreplication fork protection complex
60032508biological_processDNA duplex unwinding
60042555cellular_componentMCM complex
60043138molecular_function3'-5' DNA helicase activity
60043596cellular_componentnuclear replication fork
60071162cellular_componentCMG complex
60097373cellular_componentMCM core complex
61902969biological_processmitotic DNA replication
61990518molecular_functionsingle-stranded 3'-5' DNA helicase activity
70000727biological_processdouble-strand break repair via break-induced replication
70000781cellular_componentchromosome, telomeric region
70003677molecular_functionDNA binding
70003678molecular_functionDNA helicase activity
70003682molecular_functionchromatin binding
70003688molecular_functionDNA replication origin binding
70003697molecular_functionsingle-stranded DNA binding
70004386molecular_functionhelicase activity
70005515molecular_functionprotein binding
70005524molecular_functionATP binding
70005634cellular_componentnucleus
70005654cellular_componentnucleoplasm
70005656cellular_componentnuclear pre-replicative complex
70005737cellular_componentcytoplasm
70006260biological_processDNA replication
70006267biological_processpre-replicative complex assembly involved in nuclear cell cycle DNA replication
70006268biological_processDNA unwinding involved in DNA replication
70006270biological_processDNA replication initiation
70006271biological_processDNA strand elongation involved in DNA replication
70006279biological_processpremeiotic DNA replication
70008270molecular_functionzinc ion binding
70009378molecular_functionfour-way junction helicase activity
70016787molecular_functionhydrolase activity
70016887molecular_functionATP hydrolysis activity
70017116molecular_functionsingle-stranded DNA helicase activity
70030466biological_processsilent mating-type cassette heterochromatin formation
70031261cellular_componentDNA replication preinitiation complex
70031298cellular_componentreplication fork protection complex
70031509biological_processsubtelomeric heterochromatin formation
70032508biological_processDNA duplex unwinding
70033260biological_processnuclear DNA replication
70042555cellular_componentMCM complex
70043138molecular_function3'-5' DNA helicase activity
70043596cellular_componentnuclear replication fork
70071162cellular_componentCMG complex
70097373cellular_componentMCM core complex
71904931molecular_functionMCM complex binding
A0003677molecular_functionDNA binding
A0003697molecular_functionsingle-stranded DNA binding
A0003896molecular_functionDNA primase activity
A0005634cellular_componentnucleus
A0005635cellular_componentnuclear envelope
A0005658cellular_componentalpha DNA polymerase:primase complex
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006269biological_processDNA replication, synthesis of primer
A0006270biological_processDNA replication initiation
A0006302biological_processdouble-strand break repair
A0046872molecular_functionmetal ion binding
A0051539molecular_function4 iron, 4 sulfur cluster binding
A1990077cellular_componentprimosome complex
B0003677molecular_functionDNA binding
B0003887molecular_functionDNA-directed DNA polymerase activity
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005635cellular_componentnuclear envelope
B0005658cellular_componentalpha DNA polymerase:primase complex
B0006260biological_processDNA replication
B0006270biological_processDNA replication initiation
B0016233biological_processtelomere capping
B0071897biological_processDNA biosynthetic process
C0000727biological_processdouble-strand break repair via break-induced replication
C0000811cellular_componentGINS complex
C0003674molecular_functionmolecular_function
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0006260biological_processDNA replication
C0006261biological_processDNA-templated DNA replication
C0006268biological_processDNA unwinding involved in DNA replication
C0031261cellular_componentDNA replication preinitiation complex
C0031298cellular_componentreplication fork protection complex
C0043596cellular_componentnuclear replication fork
C0071162cellular_componentCMG complex
C1902983biological_processDNA strand elongation involved in mitotic DNA replication
D0000228cellular_componentnuclear chromosome
D0000727biological_processdouble-strand break repair via break-induced replication
D0000811cellular_componentGINS complex
D0003674molecular_functionmolecular_function
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0006260biological_processDNA replication
D0006261biological_processDNA-templated DNA replication
D0006268biological_processDNA unwinding involved in DNA replication
D0031261cellular_componentDNA replication preinitiation complex
D0031298cellular_componentreplication fork protection complex
D0032993cellular_componentprotein-DNA complex
D0043596cellular_componentnuclear replication fork
D0071162cellular_componentCMG complex
E0000727biological_processdouble-strand break repair via break-induced replication
E0000811cellular_componentGINS complex
E0003674molecular_functionmolecular_function
E0005515molecular_functionprotein binding
E0005634cellular_componentnucleus
E0006260biological_processDNA replication
E0006261biological_processDNA-templated DNA replication
E0006268biological_processDNA unwinding involved in DNA replication
E0031261cellular_componentDNA replication preinitiation complex
E0031298cellular_componentreplication fork protection complex
E0043596cellular_componentnuclear replication fork
E0071162cellular_componentCMG complex
E1902975biological_processmitotic DNA replication initiation
F0000727biological_processdouble-strand break repair via break-induced replication
F0000811cellular_componentGINS complex
F0003674molecular_functionmolecular_function
F0005515molecular_functionprotein binding
F0005634cellular_componentnucleus
F0006260biological_processDNA replication
F0006261biological_processDNA-templated DNA replication
F0006268biological_processDNA unwinding involved in DNA replication
F0031261cellular_componentDNA replication preinitiation complex
F0031298cellular_componentreplication fork protection complex
F0043596cellular_componentnuclear replication fork
F0071162cellular_componentCMG complex
G0006270biological_processDNA replication initiation
J0000166molecular_functionnucleotide binding
J0000510molecular_functionH3-H4 histone complex chaperone activity
J0000731biological_processDNA synthesis involved in DNA repair
J0003676molecular_functionnucleic acid binding
J0003677molecular_functionDNA binding
J0003682molecular_functionchromatin binding
J0003688molecular_functionDNA replication origin binding
J0003697molecular_functionsingle-stranded DNA binding
J0003887molecular_functionDNA-directed DNA polymerase activity
J0005515molecular_functionprotein binding
J0005634cellular_componentnucleus
J0005657cellular_componentreplication fork
J0005658cellular_componentalpha DNA polymerase:primase complex
J0005739cellular_componentmitochondrion
J0006260biological_processDNA replication
J0006270biological_processDNA replication initiation
J0006272biological_processleading strand elongation
J0006273biological_processlagging strand elongation
J0006278biological_processRNA-templated DNA biosynthetic process
J0006279biological_processpremeiotic DNA replication
J0006302biological_processdouble-strand break repair
J0008270molecular_functionzinc ion binding
J0043231cellular_componentintracellular membrane-bounded organelle
J0046872molecular_functionmetal ion binding
J0051539molecular_function4 iron, 4 sulfur cluster binding
J1902975biological_processmitotic DNA replication initiation
P0000076biological_processDNA replication checkpoint signaling
P0000723biological_processtelomere maintenance
P0000781cellular_componentchromosome, telomeric region
P0003674molecular_functionmolecular_function
P0005515molecular_functionprotein binding
P0005634cellular_componentnucleus
P0006260biological_processDNA replication
P0006281biological_processDNA repair
P0007064biological_processmitotic sister chromatid cohesion
P0007095biological_processmitotic G2 DNA damage checkpoint signaling
P0010997molecular_functionanaphase-promoting complex binding
P0030466biological_processsilent mating-type cassette heterochromatin formation
P0031297biological_processreplication fork processing
P0031298cellular_componentreplication fork protection complex
P0031509biological_processsubtelomeric heterochromatin formation
P0031573biological_processmitotic intra-S DNA damage checkpoint signaling
P0033262biological_processregulation of nuclear cell cycle DNA replication
P0033314biological_processmitotic DNA replication checkpoint signaling
P0034399cellular_componentnuclear periphery
P0043570biological_processmaintenance of DNA repeat elements
P0043596cellular_componentnuclear replication fork
P0050821biological_processprotein stabilization
P0071470biological_processcellular response to osmotic stress
S0000428cellular_componentDNA-directed RNA polymerase complex
S0003697molecular_functionsingle-stranded DNA binding
S0003896molecular_functionDNA primase activity
S0005524molecular_functionATP binding
S0005658cellular_componentalpha DNA polymerase:primase complex
S0006260biological_processDNA replication
S0006261biological_processDNA-templated DNA replication
S0006269biological_processDNA replication, synthesis of primer
S0006270biological_processDNA replication initiation
S0008270molecular_functionzinc ion binding
S0016779molecular_functionnucleotidyltransferase activity
S0043596cellular_componentnuclear replication fork
S0046872molecular_functionmetal ion binding
S1990077cellular_componentprimosome complex
X0000076biological_processDNA replication checkpoint signaling
X0003674molecular_functionmolecular_function
X0003677molecular_functionDNA binding
X0005515molecular_functionprotein binding
X0005634cellular_componentnucleus
X0005829cellular_componentcytosol
X0006260biological_processDNA replication
X0006281biological_processDNA repair
X0007064biological_processmitotic sister chromatid cohesion
X0008156biological_processnegative regulation of DNA replication
X0031297biological_processreplication fork processing
X0031298cellular_componentreplication fork protection complex
X0043111biological_processreplication fork arrest
X0043570biological_processmaintenance of DNA repeat elements
X0043596cellular_componentnuclear replication fork
X0051321biological_processmeiotic cell cycle
Y0000076biological_processDNA replication checkpoint signaling
Y0003674molecular_functionmolecular_function
Y0003677molecular_functionDNA binding
Y0005515molecular_functionprotein binding
Y0005634cellular_componentnucleus
Y0005737cellular_componentcytoplasm
Y0006281biological_processDNA repair
Y0006974biological_processDNA damage response
Y0007064biological_processmitotic sister chromatid cohesion
Y0008156biological_processnegative regulation of DNA replication
Y0031297biological_processreplication fork processing
Y0031298cellular_componentreplication fork protection complex
Y0034087biological_processestablishment of mitotic sister chromatid cohesion
Y0043111biological_processreplication fork arrest
Y0043570biological_processmaintenance of DNA repeat elements
Y0043596cellular_componentnuclear replication fork
Y0045132biological_processmeiotic chromosome segregation
Y0051321biological_processmeiotic cell cycle
Functional Information from PROSITE/UniProt
site_idPS00116
Number of Residues9
DetailsDNA_POLYMERASE_B DNA polymerase family B signature. YGDTDSVMI
ChainResidueDetails
JTYR994-ILE1002

site_idPS00847
Number of Residues9
DetailsMCM_1 MCM family signature. GVVCIDEFD
ChainResidueDetails
5GLY475-ASP483
6GLY634-ASP642
3GLY468-ASP476
4GLY627-ASP635
2GLY602-ASP610
7GLY519-ASP527

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
ChainResidueDetails
BSER126
ACYS417
ACYS434
ACYS474
7SER467
7ASN568
7ARG593
7ARG687

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956
ChainResidueDetails
7THR811
6SER372
JCYS1314
JCYS1317
JCYS1348
JCYS1353
JCYS1367
JCYS1372

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18407956
ChainResidueDetails
7SER819
2SER16
2SER23
2SER164
2SER170

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
ChainResidueDetails
7SER838
JSER240
JSER274

site_idSWS_FT_FI5
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
ChainResidueDetails
JSER82
JSER83
JSER84
JSER169

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:19779198
ChainResidueDetails
JSER170

site_idSWS_FT_FI7
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:19779198
ChainResidueDetails
JTHR172
JTHR309

site_idSWS_FT_FI8
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:19779198
ChainResidueDetails
JTHR313

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon